WormBase Tree Display for Gene: WBGene00012933
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| WBGene00012933 | SMap | S_parent | Sequence | Y47D3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mib-1 | Paper_evidence | WBPaper00040136 | |||||
| Sequence_name | Y47D3A.22 | ||||||||
| Molecular_name | Y47D3A.22 | ||||||||
| Y47D3A.22.1 | |||||||||
| CE32261 | |||||||||
| Other_name | CELE_Y47D3A.22 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | mib-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Sep 2011 14:03:09 | WBPerson2970 | Name_change | CGC_name | mib-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mib | ||||||||
| Allele (94) | |||||||||
| Strain | WBStrain00051247 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099092 | ||||||||
| 00099093 | |||||||||
| Contained_in_operon | CEOP3843 | ||||||||
| Ortholog (40) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin protein ligase activity. Expressed in vulva. Human ortholog(s) of this gene implicated in left ventricular noncompaction. Is an ortholog of human MIB1 (MIB E3 ubiquitin protein ligase 1) and MIB2 (MIB E3 ubiquitin protein ligase 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060480 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21086) | ||||
| Molecular_info | Corresponding_CDS | Y47D3A.22 | |||||||
| Corresponding_CDS_history | Y47D3A.22:wp52 | ||||||||
| Corresponding_transcript | Y47D3A.22.1 | ||||||||
| Other_sequence | CRC02014_1 | ||||||||
| Associated_feature | WBsf994328 | ||||||||
| WBsf994329 | |||||||||
| WBsf227564 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00089665 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056746 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089664 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056745 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14447 | ||||||||
| Expr14448 | |||||||||
| Expr1023212 | |||||||||
| Expr1035730 | |||||||||
| Expr1160207 | |||||||||
| Expr2013553 | |||||||||
| Expr2031786 | |||||||||
| Drives_construct | WBCnstr00040880 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction | WBInteraction000033058 | ||||||||
| WBInteraction000033059 | |||||||||
| WBInteraction000033060 | |||||||||
| WBInteraction000034030 | |||||||||
| WBInteraction000518780 | |||||||||
| WBInteraction000575609 | |||||||||
| Map_info | Map | III | Position | 8.32037 | Error | 0.023566 | |||
| Positive | Positive_clone | Y47D3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040136 | |||||||||
| WBPaper00048252 | |||||||||
| WBPaper00053831 | |||||||||
| WBPaper00054557 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
