WormBase Tree Display for Gene: WBGene00012899
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| WBGene00012899 | SMap | S_parent | Sequence | Y46G5A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y46G5A.7 | |||||||
| Molecular_name | Y46G5A.7 | ||||||||
| Y46G5A.7.1 | |||||||||
| CE38447 | |||||||||
| Other_name | CELE_Y46G5A.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y46G5A.7 | ||||||||
| DB_info | Database | AceView | gene | 2N46 | |||||
| WormQTL | gene | WBGene00012899 | |||||||
| WormFlux | gene | WBGene00012899 | |||||||
| NDB | locus_tag | CELE_Y46G5A.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012899|UniProtKB=Q9U2F9 | |||||||
| family | PTHR21503 | ||||||||
| NCBI | gene | 174904 | |||||||
| RefSeq | protein | NM_064312.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322394 | |||||||
| TrEMBL | UniProtAcc | Q9U2F9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2F9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (80) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g6248 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (65) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including germ line; head mesodermal cell; male distal tip cell; pharynx; and somatic gonad precursor based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by twelve chemicals including rotenone; bisphenol S; and Linolenic Acids based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: F-box domain. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46G5A.7 | |||||||
| Corresponding_CDS_history | Y46G5A.7:wp141 | ||||||||
| Corresponding_transcript | Y46G5A.7.1 | ||||||||
| Associated_feature | WBsf650669 | ||||||||
| WBsf650670 | |||||||||
| WBsf666265 | |||||||||
| WBsf666266 | |||||||||
| WBsf224096 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001125 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056696 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020657 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1035707 | ||||||||
| Expr1160166 | |||||||||
| Expr2007593 | |||||||||
| Expr2025829 | |||||||||
| Microarray_results | SMD_Y46G5.J | ||||||||
| SMD_Y46G5.K | |||||||||
| 182063_at | |||||||||
| A_12_P145835 | |||||||||
| GPL19516_CGZ0046854 | |||||||||
| GPL21109_Y46G5A.7 | |||||||||
| GPL8304_CE_WBGene00012899_A | |||||||||
| GPL8673_Y46G5A_7P00298 | |||||||||
| GPL8673_Y46G5A_7P00468 | |||||||||
| GPL8673_Y46G5A_7P00525 | |||||||||
| Expression_cluster (164) | |||||||||
| Map_info | Positive | Positive_clone | Y46G5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 11.028 | |||||||
| Reference | WBPaper00012854 | ||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
