WormBase Tree Display for Gene: WBGene00012877
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WBGene00012877 | SMap | S_parent | Sequence | Y45F10C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y45F10C.1 | |||||||
Molecular_name | Y45F10C.1 | ||||||||
Y45F10C.1.1 | |||||||||
CE16635 | |||||||||
Other_name | CELE_Y45F10C.1 | Accession_evidence | NDB | BX284604 | |||||
Public_name | Y45F10C.1 | ||||||||
DB_info | Database | AceView | gene | 4O420 | |||||
WormQTL | gene | WBGene00012877 | |||||||
WormFlux | gene | WBGene00012877 | |||||||
NDB | locus_tag | CELE_Y45F10C.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012877|UniProtKB=O45943 | |||||||
family | PTHR23362 | ||||||||
NCBI | gene | 189922 | |||||||
RefSeq | protein | NM_070237.2 | |||||||
TREEFAM | TREEFAM_ID | TF322256 | |||||||
TrEMBL | UniProtAcc | O45943 | |||||||
UniProt_GCRP | UniProtAcc | O45943 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (31) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Paralog (38) | |||||||||
Structured_description | Automated_description | Enriched in AFD; AVM; MSpaaaaa; sensory neurons; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and pgl-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y45F10C.1 | |||||||
Corresponding_transcript | Y45F10C.1.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00020783 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057027 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009832 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078374 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039159 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006844 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039158 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1160057 | ||||||||
Expr2007543 | |||||||||
Expr2025780 | |||||||||
Drives_construct | WBCnstr00029806 | ||||||||
Construct_product | WBCnstr00029806 | ||||||||
Microarray_results (13) | |||||||||
Expression_cluster (83) | |||||||||
Interaction | WBInteraction000295673 | ||||||||
WBInteraction000360664 | |||||||||
WBInteraction000444525 | |||||||||
Map_info | Positive | Positive_clone | Y45F10C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 10.5484 | |||||||
Method | Gene |