WormBase Tree Display for Gene: WBGene00012863
expand all nodes | collapse all nodes | view schema
| WBGene00012863 | SMap | S_parent | Sequence | Y45F3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y45F3A.8 | |||||||
| Molecular_name | Y45F3A.8 | ||||||||
| Y45F3A.8.1 | |||||||||
| CE37285 | |||||||||
| Other_name | CELE_Y45F3A.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y45F3A.8 | ||||||||
| DB_info | Database | AceView | gene | 3L678 | |||||
| 3L680 | |||||||||
| WormQTL | gene | WBGene00012863 | |||||||
| WormFlux | gene | WBGene00012863 | |||||||
| NDB | locus_tag | CELE_Y45F3A.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012863|UniProtKB=Q9XWZ0 | |||||||
| family | PTHR46103 | ||||||||
| NCBI | gene | 189910 | |||||||
| RefSeq | protein | NM_066931.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316060 | |||||||
| TrEMBL | UniProtAcc | Q9XWZ0 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWZ0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01448174 | ||||||||
| WBVar01500260 | |||||||||
| WBVar01939789 | |||||||||
| WBVar02019150 | |||||||||
| WBVar01333112 | |||||||||
| WBVar01333113 | |||||||||
| WBVar01499194 | |||||||||
| WBVar00216594 | |||||||||
| WBVar01723569 | |||||||||
| WBVar01723570 | |||||||||
| WBVar01499774 | |||||||||
| WBVar02132669 | |||||||||
| WBVar01499594 | |||||||||
| WBVar01499595 | |||||||||
| WBVar01567429 | |||||||||
| WBVar01567430 | |||||||||
| WBVar00857417 | |||||||||
| WBVar00857418 | |||||||||
| WBVar00857419 | |||||||||
| WBVar00857420 | |||||||||
| WBVar00857421 | |||||||||
| WBVar00857422 | |||||||||
| WBVar00857423 | |||||||||
| WBVar00857424 | |||||||||
| WBVar00857425 | |||||||||
| WBVar00857426 | |||||||||
| WBVar00857427 | |||||||||
| WBVar00857428 | |||||||||
| WBVar00857429 | |||||||||
| WBVar00857430 | |||||||||
| WBVar00857431 | |||||||||
| WBVar00857432 | |||||||||
| WBVar00857433 | |||||||||
| WBVar00857434 | |||||||||
| WBVar00857435 | |||||||||
| WBVar00857436 | |||||||||
| WBVar00857437 | |||||||||
| WBVar00857438 | |||||||||
| WBVar00857439 | |||||||||
| WBVar00857440 | |||||||||
| WBVar00857441 | |||||||||
| WBVar00857442 | |||||||||
| WBVar00178850 | |||||||||
| WBVar00178851 | |||||||||
| WBVar00857443 | |||||||||
| WBVar00407649 | |||||||||
| WBVar00857444 | |||||||||
| WBVar00407650 | |||||||||
| WBVar00407651 | |||||||||
| WBVar00857445 | |||||||||
| WBVar00407652 | |||||||||
| WBVar00857446 | |||||||||
| WBVar00407653 | |||||||||
| WBVar00857447 | |||||||||
| WBVar00407654 | |||||||||
| WBVar00857448 | |||||||||
| WBVar00407655 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3684 | ||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00014037 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00012864 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in g1AL; g1AR; g1P; and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by twelve chemicals including multi-walled carbon nanotube; Zidovudine; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45F3A.8 | |||||||
| Corresponding_CDS_history | Y45F3A.8:wp130 | ||||||||
| Corresponding_transcript | Y45F3A.8.1 | ||||||||
| Associated_feature | WBsf994083 | ||||||||
| WBsf994084 | |||||||||
| WBsf1015822 | |||||||||
| WBsf227474 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020614 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056616 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006421 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037106 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021279 | ||||||||
| Expr1035689 | |||||||||
| Expr1160080 | |||||||||
| Expr2007557 | |||||||||
| Expr2025793 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (154) | |||||||||
| Map_info | Positive | Positive_clone | Y45F3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 3.79087 | |||||||
| Reference | WBPaper00038491 | ||||||||
| Method | Gene |
