WormBase Tree Display for Gene: WBGene00012825
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WBGene00012825 | SMap | S_parent | Sequence | Y43F8C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y43F8C.3 | |||||||
Molecular_name | Y43F8C.3 | ||||||||
Y43F8C.3.1 | |||||||||
CE39836 | |||||||||
Other_name | CELE_Y43F8C.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | Y43F8C.3 | ||||||||
DB_info | Database | AceView | gene | 5U90 | |||||
WormQTL | gene | WBGene00012825 | |||||||
WormFlux | gene | WBGene00012825 | |||||||
NDB | locus_tag | CELE_Y43F8C.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012825|UniProtKB=Q9XWN3 | |||||||
family | PTHR22744 | ||||||||
NCBI | gene | 180282 | |||||||
RefSeq | protein | NM_075402.7 | |||||||
TrEMBL | UniProtAcc | Q9XWN3 | |||||||
UniProt_GCRP | UniProtAcc | Q9XWN3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (230) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (30) | |||||||||
Paralog (25) | |||||||||
Structured_description | Automated_description | Enriched in intestine; male-specific anatomical entity; neurons; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including 1-methylnicotinamide; Tunicamycin; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y43F8C.3 | |||||||
Corresponding_CDS_history | Y43F8C.3:wp154 | ||||||||
Corresponding_transcript | Y43F8C.3.1 | ||||||||
Other_sequence (11) | |||||||||
Associated_feature | WBsf653582 | ||||||||
WBsf669867 | |||||||||
WBsf669868 | |||||||||
WBsf669869 | |||||||||
WBsf1003317 | |||||||||
WBsf1003318 | |||||||||
WBsf1003319 | |||||||||
WBsf1003320 | |||||||||
WBsf1021788 | |||||||||
WBsf1021789 | |||||||||
WBsf1021790 | |||||||||
Experimental_info | RNAi_result | WBRNAi00019972 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007352 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020568 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019974 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00098164 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020567 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056528 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037062 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024859 | ||||||||
Expr1035673 | |||||||||
Expr1160005 | |||||||||
Expr2007519 | |||||||||
Expr2025756 | |||||||||
Microarray_results (24) | |||||||||
Expression_cluster (191) | |||||||||
Interaction (92) | |||||||||
Map_info | Positive | Positive_clone | Y43F8C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 22.5729 | |||||||
Method | Gene |