WormBase Tree Display for Gene: WBGene00012778
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| WBGene00012778 | SMap | S_parent | Sequence | Y42A5A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y42A5A.3 | |||||||
| Molecular_name | Y42A5A.3 | ||||||||
| Y42A5A.3.1 | |||||||||
| CE20257 | |||||||||
| Other_name | CELE_Y42A5A.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y42A5A.3 | ||||||||
| DB_info | Database | AceView | gene | 5L576 | |||||
| WormQTL | gene | WBGene00012778 | |||||||
| WormFlux | gene | WBGene00012778 | |||||||
| NDB | locus_tag | CELE_Y42A5A.3 | |||||||
| NCBI | gene | 189840 | |||||||
| RefSeq | protein | NM_001383399.1 | |||||||
| TREEFAM | TREEFAM_ID | TF343003 | |||||||
| TrEMBL | UniProtAcc | Q9XWZ5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWZ5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00013146 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in rectal gland cell and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty chemicals including Mercuric Chloride; levamisole; and procyanidin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y42A5A.3 | |||||||
| Corresponding_transcript | Y42A5A.3.1 | ||||||||
| Other_sequence | FD516816.1 | ||||||||
| CBC03545_1 | |||||||||
| CSC01165_1 | |||||||||
| Associated_feature | WBsf668627 | ||||||||
| WBsf003697 | |||||||||
| WBsf234497 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056429 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020512 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037018 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037016 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010890 | ||||||||
| Expr1159910 | |||||||||
| Expr2007461 | |||||||||
| Expr2025698 | |||||||||
| Drives_construct | WBCnstr00029847 | ||||||||
| Construct_product | WBCnstr00029847 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction | WBInteraction000031237 | ||||||||
| WBInteraction000170980 | |||||||||
| WBInteraction000210527 | |||||||||
| WBInteraction000253353 | |||||||||
| WBInteraction000266570 | |||||||||
| WBInteraction000359398 | |||||||||
| WBInteraction000425304 | |||||||||
| WBInteraction000449084 | |||||||||
| Map_info | Positive | Positive_clone | Y42A5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 2.94659 | |||||||
| Reference | WBPaper00028789 | ||||||||
| Method | Gene |
