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WormBase Tree Display for Gene: WBGene00012770

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Name Class

WBGene00012770SMapS_parentSequenceY41E3
IdentityVersion2
NameCGC_namesrt-47Person_evidenceWBPerson655
Sequence_nameY41E3.12
Molecular_nameY41E3.12
Y41E3.12.1
CE35659
Other_nameCELE_Y41E3.12Accession_evidenceNDBBX284604
Public_namesrt-47
DB_infoDatabaseAceViewgene4P814
WormQTLgeneWBGene00012770
WormFluxgeneWBGene00012770
NDBlocus_tagCELE_Y41E3.12
PanthergeneCAEEL|WormBase=WBGene00012770|UniProtKB=Q9U2H7
familyPTHR23021
NCBIgene189832
RefSeqproteinNM_070418.3
TREEFAMTREEFAM_IDTF315399
TrEMBLUniProtAccQ9U2H7
UniProt_GCRPUniProtAccQ9U2H7
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
202 Dec 2004 09:41:19WBPerson2970Name_changeCGC_namesrt-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrt
Allele (87)
RNASeq_FPKM (74)
GO_annotation00099272
Ortholog (101)
Paralog (70)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Expressed in AWC-OFF and head neurons.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY41E3.12
Corresponding_CDS_historyY41E3.12:wp109
Corresponding_transcriptY41E3.12.1
Associated_featureWBsf1018727
Experimental_infoRNAi_resultWBRNAi00020501Inferred_automaticallyRNAi_primary
WBRNAi00056405Inferred_automaticallyRNAi_primary
WBRNAi00037003Inferred_automaticallyRNAi_primary
Expr_patternExpr11624
Expr1018780
Expr1035652
Expr1159887
Expr2016674
Expr2034860
Drives_constructWBCnstr00019084
Microarray_results (16)
Expression_cluster (42)
InteractionWBInteraction000560939
Map_infoMapIVPosition12.8218Error0.001131
PositivePositive_cloneY41E3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene