WormBase Tree Display for Gene: WBGene00012724
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WBGene00012724 | SMap | S_parent | Sequence | Y39G8B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | sre-48 | Person_evidence | WBPerson522 | |||||
Sequence_name | Y39G8B.3 | ||||||||
Molecular_name | Y39G8B.3 | ||||||||
Y39G8B.3.1 | |||||||||
CE24245 | |||||||||
Other_name | CELE_Y39G8B.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | sre-48 | ||||||||
DB_info | Database | AceView | gene | 2O266 | |||||
WormQTL | gene | WBGene00012724 | |||||||
WormFlux | gene | WBGene00012724 | |||||||
NDB | locus_tag | CELE_Y39G8B.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012724|UniProtKB=Q9U2J4 | |||||||
family | PTHR47631 | ||||||||
NCBI | gene | 189762 | |||||||
RefSeq | protein | NM_064526.1 | |||||||
TREEFAM | TREEFAM_ID | TF316213 | |||||||
TrEMBL | UniProtAcc | Q9U2J4 | |||||||
UniProt_GCRP | UniProtAcc | Q9U2J4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-48 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sre | ||||||||
Allele (99) | |||||||||
Strain | WBStrain00032860 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00099319 | ||||||||
00099320 | |||||||||
00119757 | |||||||||
00119758 | |||||||||
Ortholog (19) | |||||||||
Paralog (45) | |||||||||
Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y39G8B.3 | |||||||
Corresponding_transcript | Y39G8B.3.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00099493 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056285 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00099695 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00099291 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00099897 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103591 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020418 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018092 | ||||||||
Expr1159769 | |||||||||
Expr2016300 | |||||||||
Expr2034526 | |||||||||
Microarray_results (16) | |||||||||
Expression_cluster (42) | |||||||||
Map_info | Map | II | Position | 21.728 | Error | 0.043482 | |||
Positive | Positive_clone | Y39G8B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |