WormBase Tree Display for Gene: WBGene00012675
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| WBGene00012675 | SMap | S_parent | Sequence | Y39B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y39B6A.13 | |||||||
| Molecular_name | Y39B6A.13 | ||||||||
| Y39B6A.13.1 | |||||||||
| CE21694 | |||||||||
| Other_name | Y39B6B.s | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39B6A.13 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y39B6A.13 | ||||||||
| DB_info | Database | AceView | gene | 5T592 | |||||
| WormQTL | gene | WBGene00012675 | |||||||
| WormFlux | gene | WBGene00012675 | |||||||
| NDB | locus_tag | CELE_Y39B6A.13 | |||||||
| NCBI | gene | 189731 | |||||||
| RefSeq | protein | NM_171595.6 | |||||||
| TREEFAM | TREEFAM_ID | TF319499 | |||||||
| TrEMBL | UniProtAcc | Q9NEU1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9NEU1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5488 | ||||||||
| Ortholog (12) | |||||||||
| Structured_description | Automated_description | Enriched in AFD; body wall muscle cell; germ line; germline precursor cell; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including rotenone; Zidovudine; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39B6A.13 | |||||||
| Corresponding_transcript | Y39B6A.13.1 | ||||||||
| Other_sequence | CBC11924_1 | ||||||||
| Associated_feature | WBsf653551 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00094910 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00061585 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020391 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036925 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056164 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020891 | ||||||||
| Expr1035607 | |||||||||
| Expr1159672 | |||||||||
| Expr2007363 | |||||||||
| Expr2025597 | |||||||||
| Microarray_results | SMD_Y39B6B.S | ||||||||
| 183364_at | |||||||||
| A_12_P114169 | |||||||||
| Aff_Y39B6.S | |||||||||
| GPL13394_WBGene00012675 | |||||||||
| GPL13914_Y39B6A.13 | |||||||||
| GPL14144_Y39B6A.13_423-482_0.926_1_A | |||||||||
| GPL19516_CGZ0044821 | |||||||||
| GPL21109_Y39B6A.13 | |||||||||
| GPL3518_CE21694 | |||||||||
| GPL8304_CE_WBGene00012675_A | |||||||||
| GPL8304_CE_WBGene00012675_C | |||||||||
| GPL8673_Y39B6A_13P00039 | |||||||||
| GPL8673_Y39B6A_13P00240 | |||||||||
| GPL8673_Y39B6A_13P00461 | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction | WBInteraction000521110 | ||||||||
| WBInteraction000548159 | |||||||||
| WBInteraction000548791 | |||||||||
| Map_info | Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 20.1976 | |||||||
| Method | Gene |
