WormBase Tree Display for Gene: WBGene00012675
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WBGene00012675 | SMap | S_parent | Sequence | Y39B6A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y39B6A.13 | |||||||
Molecular_name | Y39B6A.13 | ||||||||
Y39B6A.13.1 | |||||||||
CE21694 | |||||||||
Other_name | Y39B6B.s | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y39B6A.13 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | Y39B6A.13 | ||||||||
DB_info | Database | AceView | gene | 5T592 | |||||
WormQTL | gene | WBGene00012675 | |||||||
WormFlux | gene | WBGene00012675 | |||||||
NDB | locus_tag | CELE_Y39B6A.13 | |||||||
NCBI | gene | 189731 | |||||||
RefSeq | protein | NM_171595.6 | |||||||
TREEFAM | TREEFAM_ID | TF319499 | |||||||
TrEMBL | UniProtAcc | Q9NEU1 | |||||||
UniProt_GCRP | UniProtAcc | Q9NEU1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar01499709 | ||||||||
WBVar01876097 | |||||||||
WBVar00066482 | |||||||||
WBVar00104739 | |||||||||
WBVar00066487 | |||||||||
WBVar00600874 | |||||||||
WBVar01499566 | |||||||||
WBVar01750831 | |||||||||
WBVar01097846 | |||||||||
WBVar01543389 | |||||||||
WBVar01097847 | |||||||||
WBVar00317331 | |||||||||
WBVar01465855 | |||||||||
WBVar01465856 | |||||||||
WBVar01465858 | |||||||||
WBVar01465859 | |||||||||
WBVar01465861 | |||||||||
WBVar01465862 | |||||||||
WBVar01499446 | |||||||||
WBVar00487111 | |||||||||
WBVar00487112 | |||||||||
WBVar00487113 | |||||||||
WBVar00487114 | |||||||||
WBVar01498549 | |||||||||
WBVar01499299 | |||||||||
WBVar01693134 | |||||||||
WBVar01639106 | |||||||||
WBVar01639107 | |||||||||
WBVar01498958 | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP5488 | ||||||||
Ortholog (12) | |||||||||
Structured_description | Automated_description | Enriched in AFD; body wall muscle cell; germ line; germline precursor cell; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including rotenone; Zidovudine; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y39B6A.13 | |||||||
Corresponding_transcript | Y39B6A.13.1 | ||||||||
Other_sequence | CBC11924_1 | ||||||||
Associated_feature | WBsf653551 | ||||||||
Experimental_info | RNAi_result | WBRNAi00094910 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061585 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020391 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036925 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056164 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020891 | ||||||||
Expr1035607 | |||||||||
Expr1159672 | |||||||||
Expr2007363 | |||||||||
Expr2025597 | |||||||||
Microarray_results (15) | |||||||||
Expression_cluster (118) | |||||||||
Interaction | WBInteraction000521110 | ||||||||
WBInteraction000548159 | |||||||||
WBInteraction000548791 | |||||||||
Map_info | Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 20.1976 | |||||||
Method | Gene |