WormBase Tree Display for Gene: WBGene00012674
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| WBGene00012674 | SMap | S_parent | Sequence | Y39B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bed-1 | Person_evidence | WBPerson1997 | |||||
| Sequence_name | Y39B6A.12 | ||||||||
| Molecular_name | Y39B6A.12a | ||||||||
| Y39B6A.12a.1 | |||||||||
| CE29855 | |||||||||
| Y39B6A.12b | |||||||||
| CE38444 | |||||||||
| Y39B6A.12b.1 | |||||||||
| Other_name | Y39B6B.t | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y39B6B.u | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39B6A.12 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | bed-1 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00012674 | |||||
| WormFlux | gene | WBGene00012674 | |||||||
| NDB | locus_tag | CELE_Y39B6A.12 | |||||||
| NCBI | gene | 180257 | |||||||
| RefSeq | protein | NM_001029057.2 | |||||||
| NM_001029056.5 | |||||||||
| TrEMBL | UniProtAcc | Q56VX2 | |||||||
| Q8MYP3 | |||||||||
| UniProt_GCRP | UniProtAcc | Q56VX2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Apr 2008 09:32:24 | WBPerson2970 | Name_change | CGC_name | bed-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bed | ||||||||
| Allele (98) | |||||||||
| Strain | WBStrain00033867 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081161 | ||||||||
| 00119704 | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and metal ion binding activity. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39B6A.12a | |||||||
| Y39B6A.12b | |||||||||
| Corresponding_CDS_history | Y39B6A.12:wp141 | ||||||||
| Corresponding_transcript | Y39B6A.12a.1 | ||||||||
| Y39B6A.12b.1 | |||||||||
| Other_sequence | CJC11987_1 | ||||||||
| Associated_feature (18) | |||||||||
| Transcription_factor | WBTranscriptionFactor000861 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00071610 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036926 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026665 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064438 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056163 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017612 | ||||||||
| Expr1035606 | |||||||||
| Expr1159671 | |||||||||
| Expr2009589 | |||||||||
| Expr2027826 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction | WBInteraction000028795 | ||||||||
| WBInteraction000029293 | |||||||||
| WBInteraction000384761 | |||||||||
| WBInteraction000502524 | |||||||||
| WBInteraction000544120 | |||||||||
| WBInteraction000544223 | |||||||||
| WBInteraction000575053 | |||||||||
| Map_info | Map | V | Position | 20.1994 | Error | 0.002842 | |||
| Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
