WormBase Tree Display for Gene: WBGene00012643
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WBGene00012643 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y39A1A.3 | |||||||
Molecular_name | Y39A1A.3 | ||||||||
Y39A1A.3.1 | |||||||||
CE45493 | |||||||||
Other_name | CELE_Y39A1A.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | Y39A1A.3 | ||||||||
DB_info | Database | AceView | gene | 3L682 | |||||
WormQTL | gene | WBGene00012643 | |||||||
WormFlux | gene | WBGene00012643 | |||||||
NDB | locus_tag | CELE_Y39A1A.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012643|UniProtKB=G5EEN7 | |||||||
family | PTHR16537 | ||||||||
NCBI | gene | 176479 | |||||||
RefSeq | protein | NM_066933.4 | |||||||
TREEFAM | TREEFAM_ID | TF320182 | |||||||
TrEMBL | UniProtAcc | G5EEN7 | |||||||
UniProt_GCRP | UniProtAcc | G5EEN7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (28) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00016699 | ||||||||
00016700 | |||||||||
Contained_in_operon | CEOP3684 | ||||||||
Ortholog (22) | |||||||||
Structured_description | Automated_description | Enriched in AFD; NSM; germ line; intestine; and neurons based on RNA-seq and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on tiling array; proteomic; RNA-seq; and microarray studies. Is affected by six chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Sjoegren syndrome/scleroderma autoantigen 1 and Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27). Is an ortholog of human ZNRD2 (zinc ribbon domain containing 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y39A1A.3 | |||||||
Corresponding_CDS_history | Y39A1A.3:wp220 | ||||||||
Corresponding_transcript | Y39A1A.3.1 | ||||||||
Other_sequence (21) | |||||||||
Associated_feature | WBsf227476 | ||||||||
Experimental_info | RNAi_result | WBRNAi00056114 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022479 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000396 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062428 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033436 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006740 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013566 | ||||||||
Expr1035584 | |||||||||
Expr1159631 | |||||||||
Expr2007348 | |||||||||
Expr2025583 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (80) | |||||||||
Interaction (23) | |||||||||
Map_info (2) | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |