WormBase Tree Display for Gene: WBGene00012618
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WBGene00012618 | SMap | S_parent | Sequence | Y38H6C | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0000336 | |||||
Gene_class | dct | ||||||
Allele (133) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (13) | |||||||
Paralog | WBGene00014814 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||
Structured_description | Automated_description | Enriched in neurons and retrovesicular ganglion based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including Alovudine; Sodium Chloride; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | Y38H6C.5:wp194 | |||||
Y38H6C.5:wp227 | |||||||
Y38H6C.5:wp262 | |||||||
Corresponding_pseudogene | Y38H6C.5 | ||||||
Associated_feature | WBsf662247 | ||||||
WBsf1003579 | |||||||
WBsf1003580 | |||||||
WBsf1021974 | |||||||
Experimental_info | Expr_pattern | Expr1025288 | |||||
Expr1159603 | |||||||
Expr2010809 | |||||||
Expr2029046 | |||||||
Microarray_results | SMD_Y38H6C.5 | ||||||
190665_at | |||||||
Aff_Y38H6C.5 | |||||||
GPL19516_CGZ0044700 | |||||||
GPL21109_Y38H6C.5 | |||||||
GPL8673_Y38H6C_5P01523 | |||||||
GPL8673_Y38H6C_5P02025 | |||||||
Expression_cluster (98) | |||||||
Interaction | WBInteraction000345348 | ||||||
WBInteraction000418107 | |||||||
WBInteraction000561112 | |||||||
Map_info | Map | V | Position | 25.0059 | Error | 0.000267 | |
Positive | Positive_clone | Y38H6C | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031095 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |