WormBase Tree Display for Gene: WBGene00012615
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WBGene00012615 | SMap | S_parent | Sequence | Y38H6C | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dct | ||||||
Allele (46) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (13) | |||||||
Paralog (18) | |||||||
Structured_description | Automated_description | Enriched in several structures, including ABplapaaap; ABprapaaap; MSaaaaapa; head mesodermal cell; and neurons based on tiling array; RNA-seq; proteomic; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and pie-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eighteen chemicals including Cyclosporine; dimedone; and rotenone based on proteomic; RNA-seq; and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4473) and Protein of unknown function DUF4473. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y38H6C.1a | |||||
Y38H6C.1b | |||||||
Corresponding_transcript | Y38H6C.1a.1 | ||||||
Y38H6C.1b.1 | |||||||
Other_sequence | FD515820.1 | ||||||
FD514992.1 | |||||||
Tcir_isotig12796 | |||||||
CSC01400_1 | |||||||
CJC01292_1 | |||||||
FD516725.1 | |||||||
CBC00670_1 | |||||||
CRC03816_1 | |||||||
Associated_feature | WBsf653614 | ||||||
WBsf1003575 | |||||||
Experimental_info | RNAi_result | WBRNAi00056060 | Inferred_automatically | RNAi_primary | |||
WBRNAi00020311 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020696 | ||||||
Expr1035577 | |||||||
Expr1159583 | |||||||
Expr2010815 | |||||||
Expr2029052 | |||||||
Drives_construct | WBCnstr00029882 | ||||||
Construct_product | WBCnstr00029882 | ||||||
Microarray_results (31) | |||||||
Expression_cluster (301) | |||||||
Interaction (93) | |||||||
Map_info | Map | V | Position | 25.0039 | Error | 0.000384 | |
Positive | Positive_clone | Y38H6C | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031095 | ||||||
WBPaper00033099 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |