WormBase Tree Display for Gene: WBGene00012608
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| WBGene00012608 | SMap | S_parent | Sequence | Y38F1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hphd-1 | Paper_evidence | WBPaper00049812 | |||||
| Person_evidence | WBPerson1997 | ||||||||
| WBPerson21243 | |||||||||
| Sequence_name | Y38F1A.6 | ||||||||
| Molecular_name | Y38F1A.6 | ||||||||
| Y38F1A.6.1 | |||||||||
| CE24222 | |||||||||
| Y38F1A.6.2 | |||||||||
| Y38F1A.6.3 | |||||||||
| Y38F1A.6.4 | |||||||||
| Y38F1A.6.5 | |||||||||
| Y38F1A.6.6 | |||||||||
| Y38F1A.6.7 | |||||||||
| Other_name | CELE_Y38F1A.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | hphd-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 13 Sep 2016 10:15:14 | WBPerson2970 | Name_change | CGC_name | hphd-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hphd | ||||||||
| Allele (56) | |||||||||
| Strain | WBStrain00003223 | ||||||||
| WBStrain00033247 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable alcohol dehydrogenase (NAD+) activity and hydroxyacid-oxoacid transhydrogenase activity. Predicted to be involved in glutamate catabolic process via 2-oxoglutarate. Predicted to be located in mitochondrion. Is an ortholog of human ADHFE1 (alcohol dehydrogenase iron containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38F1A.6 | |||||||
| Corresponding_transcript | Y38F1A.6.1 | ||||||||
| Y38F1A.6.2 | |||||||||
| Y38F1A.6.3 | |||||||||
| Y38F1A.6.4 | |||||||||
| Y38F1A.6.5 | |||||||||
| Y38F1A.6.6 | |||||||||
| Y38F1A.6.7 | |||||||||
| Other_sequence (62) | |||||||||
| Associated_feature | WBsf650678 | ||||||||
| WBsf666276 | |||||||||
| WBsf666277 | |||||||||
| WBsf666278 | |||||||||
| WBsf990288 | |||||||||
| WBsf224128 | |||||||||
| WBsf224129 | |||||||||
| WBsf224130 | |||||||||
| WBsf224131 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056037 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Chronogram870 | ||||||||
| Expr6938 | |||||||||
| Expr1019273 | |||||||||
| Expr1035575 | |||||||||
| Expr1159560 | |||||||||
| Expr2012551 | |||||||||
| Expr2030788 | |||||||||
| Drives_construct | WBCnstr00003698 | ||||||||
| WBCnstr00029885 | |||||||||
| Construct_product | WBCnstr00029885 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (354) | |||||||||
| Interaction (44) | |||||||||
| Map_info | Map | II | Position | 13.3688 | |||||
| Positive | Positive_clone | Y38F1A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049812 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064263 | |||||||||
| WBPaper00065140 | |||||||||
| WBPaper00065272 | |||||||||
| WBPaper00065288 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
