WormBase Tree Display for Gene: WBGene00012538
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WBGene00012538 | SMap | S_parent | Sequence | Y37A1B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | semo-1 | Person_evidence | WBPerson3185 | |||
Sequence_name | Y37A1B.5 | ||||||
Molecular_name | Y37A1B.5a | ||||||
Y37A1B.5a.1 | |||||||
CE19075 | |||||||
Y37A1B.5b | |||||||
CE44562 | |||||||
Y37A1B.5b.1 | |||||||
Y37A1B.5c | |||||||
Other_name | CELE_Y37A1B.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | semo-1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | semo | ||||||
Allele (143) | |||||||
Possibly_affected_by | WBVar02157820 | ||||||
Strain | WBStrain00001724 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00104342 | ||||||
00104343 | |||||||
00119630 | |||||||
Ortholog (39) | |||||||
Paralog | WBGene00011249 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enables methanethiol oxidase activity. Expressed in hypodermal cell. Human ortholog(s) of this gene implicated in glaucoma. Is an ortholog of human SELENBP1 (selenium binding protein 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:1686 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10719) | ||
Molecular_info | Corresponding_CDS | Y37A1B.5a | |||||
Y37A1B.5b | |||||||
Corresponding_transcript | Y37A1B.5c | ||||||
Y37A1B.5a.1 | |||||||
Y37A1B.5b.1 | |||||||
Other_sequence (39) | |||||||
Associated_feature | WBsf1018595 | ||||||
WBsf229475 | |||||||
Experimental_info | RNAi_result | WBRNAi00055856 | Inferred_automatically | RNAi_primary | |||
WBRNAi00020206 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (11) | |||||||
Drives_construct | WBCnstr00002549 | ||||||
WBCnstr00004373 | |||||||
WBCnstr00019922 | |||||||
WBCnstr00041572 | |||||||
Construct_product | WBCnstr00041572 | ||||||
Regulate_expr_cluster | WBPaper00058648:Y37A1B.5(RNAi)_downregulated | ||||||
WBPaper00058648:Y37A1B.5(RNAi)_upregulated | |||||||
Microarray_results (25) | |||||||
Expression_cluster (270) | |||||||
Interaction | WBInteraction000363177 | ||||||
WBInteraction000388085 | |||||||
WBInteraction000519376 | |||||||
WBInteraction000549759 | |||||||
WBInteraction000560231 | |||||||
WBInteraction000574144 | |||||||
WBInteraction000577964 | |||||||
WBInteraction000578682 | |||||||
WBInteraction000580822 | |||||||
Map_info | Positive | Positive_clone | Y37A1B | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | IV | 11.2977 | |||||
Reference (9) | |||||||
Method | Gene |