WormBase Tree Display for Gene: WBGene00012533

WBGene00012533 SMap: S_parent: Sequence: Y36E3A
  Identity: Version: 2
    Name: CGC_name: fbxa-209 Person_evidence: WBPerson655
      Sequence_name: Y36E3A.1
      Molecular_name: Y36E3A.1
        Y36E3A.1.1
        CE44006
      Other_name: CELE_Y36E3A.1 Accession_evidence: NDB BX284605
      Public_name: fbxa-209
    DB_info: Database: AceView gene 5P902
        WormQTL gene WBGene00012533
        WormFlux gene WBGene00012533
        NDB locus_tag CELE_Y36E3A.1
        Panther gene CAEEL|WormBase=WBGene00012533|UniProtKB=Q9XWZ4
          family PTHR23015
        NCBI gene 189597
        RefSeq protein NM_074437.3
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q9XWZ4
        UniProt_GCRP UniProtAcc Q9XWZ4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Mar 2007 11:55:19 WBPerson2970 Name_change: CGC_name: fbxa-209
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (93)
    RNASeq_FPKM (74)
    Ortholog: WBGene00069878 Caenorhabditis remanei From_analysis: OMA
      WBGene00069877 Caenorhabditis remanei From_analysis: OMA
      WBGene00149320 Caenorhabditis brenneri From_analysis: TreeFam
      chrV_pilon.g14385 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrV_pilon.g16816 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrV_pilon.g17305 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (216)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in ASER; OLL; PLM; PVD; and intestine based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including stavudine; antimycin; and Cry5B based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y36E3A.1
    Corresponding_CDS_history: Y36E3A.1:wp206
    Corresponding_transcript: Y36E3A.1.1
    Other_sequence: XIC01873_1
      JI459879.1
      XI02414
    Associated_feature: WBsf235058
      WBsf235059
  Experimental_info: RNAi_result: WBRNAi00036773 Inferred_automatically: RNAi_primary
      WBRNAi00055844 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023771
      Expr1159371
      Expr2011518
      Expr2029755
    Microarray_results (13)
    Expression_cluster (100)
    Interaction: WBInteraction000403059
  Map_info: Map: V Position: 8.08736 Error: 0.003784
    Positive: Positive_clone: Y36E3A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene