WormBase Tree Display for Gene: WBGene00012527

WBGene00012527 SMap: S_parent: Sequence: Y32F6A
  Identity: Version: 2
    Name: CGC_name: set-22 Person_evidence: WBPerson1730
            WBPerson268
            WBPerson632
      Sequence_name: Y32F6A.1
      Molecular_name: Y32F6A.1
        Y32F6A.1.1
        CE20203
        Y32F6A.1.2
      Other_name: CELE_Y32F6A.1 Accession_evidence: NDB BX284605
      Public_name: set-22
    DB_info: Database: AceView gene 5K921
        WormQTL gene WBGene00012527
        WormFlux gene WBGene00012527
        NDB locus_tag CELE_Y32F6A.1
        NCBI gene 179457
        RefSeq protein NM_001392594.1
        TREEFAM TREEFAM_ID TF316282
        TrEMBL UniProtAcc Q9XXS2
        UniProt_GCRP UniProtAcc Q9XXS2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 May 2007 10:33:07 WBPerson2970 Name_change: CGC_name: set-22
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: set
    Allele (69)
    Strain: WBStrain00032522
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5558
    Ortholog (18)
    Structured_description: Concise_description: set-22 encodes a SET domain-containing protein with no non-nematode orthologs; neither set-22(n5015) nor set-22(RNAi) have any obvious phenotypes. Paper_evidence: WBPaper00030864
          Curator_confirmed: WBPerson567
          Date_last_updated: 11 Oct 2007 00:00:00
      Automated_description: Enriched in several structures, including ABalapppaa; AFD; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SET domain superfamily and SET domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y32F6A.1
    Corresponding_transcript: Y32F6A.1.1
      Y32F6A.1.2
    Other_sequence: CR00188
      CRC01420_1
      CBC04028_1
    Associated_feature: WBsf647156
  Experimental_info: RNAi_result: WBRNAi00020174 Inferred_automatically: RNAi_primary
      WBRNAi00082705 Inferred_automatically: RNAi_primary
      WBRNAi00091509 Inferred_automatically: RNAi_primary
      WBRNAi00113455 Inferred_automatically: RNAi_primary
      WBRNAi00001475 Inferred_automatically: RNAi_primary
      WBRNAi00055782 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14370
      Expr1014637
      Expr1035542
      Expr1159315
      Expr2015767
      Expr2034000
    Drives_construct: WBCnstr00029924
    Construct_product: WBCnstr00029924
    Microarray_results (21)
    Expression_cluster (140)
    Interaction (202)
  Map_info: Map: V Position: 2.55472 Error: 0.001161
    Positive: Positive_clone: Y32F6A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030864
    WBPaper00036383
    WBPaper00065308
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene