WormBase Tree Display for Gene: WBGene00012483

WBGene00012483 SMap: S_parent: Sequence: Y18D10A
  Identity: Version: 2
    Name: CGC_name: coa-5 Person_evidence: WBPerson117
      Sequence_name: Y18D10A.16
      Molecular_name: Y18D10A.16
        Y18D10A.16.1
        CE21412
      Other_name: CELE_Y18D10A.16 Accession_evidence: NDB BX284601
      Public_name: coa-5
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Sep 2017 13:25:30 WBPerson2970 Name_change: CGC_name: coa-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: coa
    Allele: WBVar00681950
      WBVar00349182
      WBVar01499739
      WBVar01499999
      WBVar01434074
    RNASeq_FPKM (74)
    GO_annotation: 00103040
      00103041
    Ortholog: WBGene00029863 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00067727 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00164534 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00126855 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00154304 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226579 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g5256 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10723 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10196 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21131 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14549 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7950 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2337 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8927 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4462 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00095.g4200 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y18D10A.16 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13896 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_20092 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_003452 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01496 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8902 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10056110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2609 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245241 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00275355 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259794 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292665 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000003795 Saccharomyces cerevisiae From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0040751 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060825-53 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:33848 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1923428 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1565095 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in mitochondrial complex IV deficiency nuclear type 9. Is an ortholog of human COA5 (cytochrome c oxidase assembly factor 5). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080359 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:33848)
  Molecular_info: Corresponding_CDS: Y18D10A.16
    Corresponding_transcript: Y18D10A.16.1
    Other_sequence (29)
    Associated_feature: WBsf047643
      WBsf649687
      WBsf985719
  Experimental_info: RNAi_result: WBRNAi00026613 Inferred_automatically: RNAi_primary
      WBRNAi00004539 Inferred_automatically: RNAi_primary
      WBRNAi00055609 Inferred_automatically: RNAi_primary
      WBRNAi00026612 Inferred_automatically: RNAi_primary
      WBRNAi00026614 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012955
      Expr1035531
      Expr1159116
      Expr2007124
      Expr2025352
    Microarray_results (19)
    Expression_cluster (122)
    Interaction: WBInteraction000258373
      WBInteraction000420742
      WBInteraction000423349
      WBInteraction000464076
      WBInteraction000466701
      WBInteraction000470209
  Map_info: Positive: Positive_clone: Y18D10A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 14.1816
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene