WormBase Tree Display for Gene: WBGene00012482
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| WBGene00012482 | SMap | S_parent | Sequence | Y18D10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-106 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | Y18D10A.12 | ||||||||
| Molecular_name | Y18D10A.12 | ||||||||
| Y18D10A.12.1 | |||||||||
| CE21408 | |||||||||
| Other_name | CELE_Y18D10A.12 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | clec-106 | ||||||||
| DB_info | Database | AceView | gene | 1N458 | |||||
| WormQTL | gene | WBGene00012482 | |||||||
| WormFlux | gene | WBGene00012482 | |||||||
| NDB | locus_tag | CELE_Y18D10A.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012482|UniProtKB=Q9XW11 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 173154 | |||||||
| RefSeq | protein | NM_060849.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q9XW11 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XW11 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-106 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00032953 | ||||||||
| WBStrain00032977 | |||||||||
| WBStrain00032978 | |||||||||
| WBStrain00037272 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (43) | |||||||||
| Paralog (127) | |||||||||
| Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on RNA-seq and microarray studies. Is affected by resveratrol and Diazinon based on microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y18D10A.12 | |||||||
| Corresponding_transcript | Y18D10A.12.1 | ||||||||
| Other_sequence | CSC01982_1 | ||||||||
| FD517537.1 | |||||||||
| Associated_feature | WBsf220462 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00004536 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00095020 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095029 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036691 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055607 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017665 | ||||||||
| Expr1159114 | |||||||||
| Expr2010052 | |||||||||
| Expr2028294 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (58) | |||||||||
| Interaction (64) | |||||||||
| Map_info | Map | I | Position | 14.1661 | Error | 0.003329 | |||
| Positive | Positive_clone | Y18D10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031686 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
