WormBase Tree Display for Gene: WBGene00012428

WBGene00012428 SMap: S_parent: Sequence: Y11D7A
  Identity: Version: 1
    Name: Sequence_name: Y11D7A.3
      Molecular_name: Y11D7A.3a
        Y11D7A.3a.1
        CE19029
        Y11D7A.3b
        CE39969
        Y11D7A.3c
        CE49697
        Y11D7A.3b.1
        Y11D7A.3c.1
      Other_name: CELE_Y11D7A.3 Accession_evidence: NDB BX284604
      Public_name: Y11D7A.3
    DB_info: Database: AceView gene 4K5
        WormQTL gene WBGene00012428
        WormFlux gene WBGene00012428
        NDB locus_tag CELE_Y11D7A.3
        Panther gene CAEEL|WormBase=WBGene00012428|UniProtKB=Q9XWR7
          family PTHR23294
        NCBI gene 177745
        RefSeq protein NM_001047552.4
            NM_001307130.3
            NM_001047553.8
        TREEFAM TREEFAM_ID TF315284
        TrEMBL UniProtAcc Q9XWR7
            X5LXA3
            Q2A7S9
        UniProt_GCRP UniProtAcc Q9XWR7
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (103)
    RNASeq_FPKM (74)
    GO_annotation: 00080248
      00080249
    Ortholog: WBGene00035417 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00063928 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00148249 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00142946 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00123480 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00096560 Pristionchus pacificus From_analysis: OMA
      WBGene00118834 Pristionchus pacificus From_analysis: OMA
      WBGene00226552 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g11409 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g11410 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14873 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15371 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19319 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7826 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26777 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4646 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14851 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g2209 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7250 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00433.g10800 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y11D7A.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold523.g2962 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00498.g12126 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21865 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013304 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10860 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40354300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11258 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00074189 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00240143 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00240144 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00266707 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288306 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0038053 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      ZFIN:ZDB-GENE-050913-140 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      HGNC:25458 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      MGI:1917150 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      RGD:1307394 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
    Paralog (16)
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of human MFSD11 (major facilitator superfamily domain containing 11). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y11D7A.3a
      Y11D7A.3b
      Y11D7A.3c
    Corresponding_transcript: Y11D7A.3a.1
      Y11D7A.3b.1
      Y11D7A.3c.1
    Other_sequence: CR03380
      CRC11457_1
    Associated_feature: WBsf646220
      WBsf646221
      WBsf660498
      WBsf660499
      WBsf660500
      WBsf228800
      WBsf228801
  Experimental_info: RNAi_result: WBRNAi00036641 Inferred_automatically: RNAi_primary
      WBRNAi00055538 Inferred_automatically: RNAi_primary
      WBRNAi00020049 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022890
      Expr1035501
      Expr1159035
      Expr2007082
      Expr2025310
    Microarray_results (24)
    Expression_cluster (215)
    Interaction: WBInteraction000385369
      WBInteraction000390483
      WBInteraction000457335
      WBInteraction000580816
  Map_info: Positive: Positive_clone: Y11D7A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 4.11224
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene