WormBase Tree Display for Gene: WBGene00012412
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WBGene00012412 | SMap | S_parent | Sequence | Y7A5A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | Y7A5A.6 | |||||
Molecular_name | Y7A5A.6 | ||||||
Y7A5A.6.1 | |||||||
CE53564 | |||||||
Other_name | CELE_Y7A5A.6 | Accession_evidence | NDB | BX284606 | |||
Public_name | Y7A5A.6 | ||||||
DB_info | Database | AceView | gene | XQ416 | |||
WormQTL | gene | WBGene00012412 | |||||
WormFlux | gene | WBGene00012412 | |||||
NDB | locus_tag | CELE_Y7A5A.6 | |||||
NCBI | gene | 42101362 | |||||
RefSeq | protein | NM_001375194.2 | |||||
TrEMBL | UniProtAcc | Q9XVY8 | |||||
UniProt_GCRP | UniProtAcc | Q9XVY8 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Split_into | WBGene00304824 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (14) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00081860 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||
chrX_pilon.g20802 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; ABprpppaaa; AFD; MSpaaapa; and rectal epithelial cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; elt-2; and csr-1 based on RNA-seq and microarray studies. Is affected by four chemicals including Rifampin; allantoin; and paraquat based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y7A5A.6 | |||||
Corresponding_CDS_history | Y7A5A.6:wp272 | ||||||
Corresponding_transcript | Y7A5A.6.1 | ||||||
Associated_feature | WBsf671401 | ||||||
WBsf671402 | |||||||
Experimental_info | RNAi_result | WBRNAi00021505 | Inferred_automatically | RNAi_primary | |||
WBRNAi00058539 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025984 | ||||||
Expr1161943 | |||||||
Expr2008453 | |||||||
Expr2026694 | |||||||
Drives_construct | WBCnstr00029965 | ||||||
Construct_product | WBCnstr00029965 | ||||||
Microarray_results | SMD_Y7A5A.6 | ||||||
177930_at | |||||||
Aff_Y7A5A.G | |||||||
GPL14144_Y7A5A.6_17-76_0.931_1_A | |||||||
GPL19516_CGZ0054944 | |||||||
GPL21109_Y7A5A.6 | |||||||
GPL8673_Y7A5A_6P00023 | |||||||
Expression_cluster (78) | |||||||
Interaction | WBInteraction000181142 | ||||||
WBInteraction000275342 | |||||||
WBInteraction000423472 | |||||||
Map_info | Positive | Positive_clone | Y7A5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | X | 22.9612 | |||||
Method | Gene |