WormBase Tree Display for Gene: WBGene00012401
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| WBGene00012401 | SMap | S_parent | Sequence | Y6E2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irld-57 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y6E2A.8 | ||||||||
| Molecular_name | Y6E2A.8 | ||||||||
| Y6E2A.8.1 | |||||||||
| CE51893 | |||||||||
| Other_name | CELE_Y6E2A.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | irld-57 | ||||||||
| DB_info | Database | AceView | gene | 5Q206 | |||||
| WormQTL | gene | WBGene00012401 | |||||||
| WormFlux | gene | WBGene00012401 | |||||||
| NDB | locus_tag | CELE_Y6E2A.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012401|UniProtKB=O45975 | |||||||
| family | PTHR21662 | ||||||||
| NCBI | gene | 189379 | |||||||
| RefSeq | protein | NM_001348587.2 | |||||||
| TrEMBL | UniProtAcc | O45975 | |||||||
| UniProt_GCRP | UniProtAcc | O45975 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-57 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | irld | ||||||||
| Allele (126) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Paralog (66) | |||||||||
| Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including methylmercuric chloride; Tunicamycin; and Cry5B based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Receptor L domain and Receptor L-domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y6E2A.8 | |||||||
| Corresponding_CDS_history | Y6E2A.8:wp174 | ||||||||
| Y6E2A.8:wp257 | |||||||||
| Corresponding_transcript | Y6E2A.8.1 | ||||||||
| Associated_feature | WBsf235082 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00058108 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037750 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026527 | ||||||||
| Expr1161520 | |||||||||
| Expr2012856 | |||||||||
| Expr2031090 | |||||||||
| Drives_construct | WBCnstr00029970 | ||||||||
| Construct_product | WBCnstr00029970 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction | WBInteraction000204909 | ||||||||
| WBInteraction000215899 | |||||||||
| WBInteraction000276830 | |||||||||
| WBInteraction000282262 | |||||||||
| WBInteraction000413453 | |||||||||
| WBInteraction000423573 | |||||||||
| Map_info | Map | V | Position | 8.68231 | |||||
| Positive | Positive_clone | Y6E2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064188 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
