WormBase Tree Display for Gene: WBGene00012347
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| WBGene00012347 | SMap | S_parent | Sequence | W08G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W08G11.3 | |||||||
| Molecular_name | W08G11.3a | ||||||||
| W08G11.3a.1 | |||||||||
| CE39423 | |||||||||
| W08G11.3b | |||||||||
| CE39424 | |||||||||
| W08G11.3c | |||||||||
| CE53019 | |||||||||
| W08G11.3a.2 | |||||||||
| W08G11.3b.1 | |||||||||
| W08G11.3c.1 | |||||||||
| Other_name | CELE_W08G11.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | W08G11.3 | ||||||||
| DB_info | Database | AceView | gene | 5Q849 | |||||
| WormQTL | gene | WBGene00012347 | |||||||
| WormFlux | gene | WBGene00012347 | |||||||
| NDB | locus_tag | CELE_W08G11.3 | |||||||
| NCBI | gene | 189304 | |||||||
| RefSeq | protein | NM_001047714.5 | |||||||
| NM_001373172.2 | |||||||||
| NM_001047715.5 | |||||||||
| TrEMBL | UniProtAcc | A0A486WYQ4 | |||||||
| Q2XMY4 | |||||||||
| Q2XMY3 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A486WYQ4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (183) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5538 | ||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in AVK; RID; and germ line based on RNA-seq studies. Is affected by several genes including hsf-1; sir-2.1; and clk-1 based on microarray; RNA-seq; and proteomic studies. Is affected by five chemicals including Zidovudine; paraquat; and resveratrol based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W08G11.3a | |||||||
| W08G11.3b | |||||||||
| W08G11.3c | |||||||||
| Corresponding_CDS_history | W08G11.3:wp151 | ||||||||
| Corresponding_transcript | W08G11.3a.1 | ||||||||
| W08G11.3a.2 | |||||||||
| W08G11.3b.1 | |||||||||
| W08G11.3c.1 | |||||||||
| Other_sequence | FD517319.1 | ||||||||
| CR10518 | |||||||||
| CBC07018_1 | |||||||||
| CSC00960_1 | |||||||||
| CRC05225_1 | |||||||||
| SS03198 | |||||||||
| JI467747.1 | |||||||||
| CRC06760_1 | |||||||||
| Associated_feature | WBsf647633 | ||||||||
| WBsf662152 | |||||||||
| WBsf982064 | |||||||||
| WBsf1002430 | |||||||||
| WBsf1002431 | |||||||||
| WBsf1021120 | |||||||||
| WBsf1021121 | |||||||||
| WBsf233103 | |||||||||
| WBsf233104 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019733 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036388 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055008 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025145 | ||||||||
| Expr1035466 | |||||||||
| Expr1158540 | |||||||||
| Expr2006870 | |||||||||
| Expr2025095 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (80) | |||||||||
| SAGE_tag | SAGE:ctgctgacgattttgcg | Strand | Antisense | ||||||
| SAGE:aagaaatgga | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ctgctgacga | Strand | Antisense | |||||||
| SAGE:aagaaatggaagcccgt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (14) | |||||||||
| Map_info | Positive | Positive_clone | W08G11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 10.0171 | |||||||
| Reference | WBPaper00010022 | ||||||||
| Method | Gene |
