WormBase Tree Display for Gene: WBGene00012345
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| WBGene00012345 | SMap | S_parent | Sequence | W08E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W08E3.4 | |||||||
| Molecular_name | W08E3.4a | ||||||||
| W08E3.4a.1 | |||||||||
| CE41273 | |||||||||
| W08E3.4b | |||||||||
| CE54287 | |||||||||
| W08E3.4b.1 | |||||||||
| Other_name | CELE_W08E3.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | W08E3.4 | ||||||||
| DB_info | Database | AceView | gene | 1N928 | |||||
| WormQTL | gene | WBGene00012345 | |||||||
| WormFlux | gene | WBGene00012345 | |||||||
| NDB | locus_tag | CELE_W08E3.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012345|UniProtKB=P91915 | |||||||
| family | PTHR10809 | ||||||||
| NCBI | gene | 189290 | |||||||
| RefSeq | protein | NM_001392964.1 | |||||||
| NM_060946.6 | |||||||||
| TrEMBL | UniProtAcc | A0A7R9SUH3 | |||||||
| P91915 | |||||||||
| UniProt_GCRP | UniProtAcc | P91915 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00010254 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00018008 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018354 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018840 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022546 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021428 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpppapa; ABaraappaa; ABplapppaa; neuronal sheath cell; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: PapD-like superfamily and Immunoglobulin-like fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W08E3.4a | |||||||
| W08E3.4b | |||||||||
| Corresponding_CDS_history | W08E3.4:wp90 | ||||||||
| W08E3.4:wp177 | |||||||||
| Corresponding_transcript | W08E3.4a.1 | ||||||||
| W08E3.4b.1 | |||||||||
| Other_sequence | CJC02406_1 | ||||||||
| Associated_feature | WBsf649697 | ||||||||
| WBsf665061 | |||||||||
| WBsf985830 | |||||||||
| WBsf985831 | |||||||||
| WBsf1011051 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036386 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054994 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004446 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020380 | ||||||||
| Expr1158526 | |||||||||
| Expr2006861 | |||||||||
| Expr2025086 | |||||||||
| Drives_construct | WBCnstr00029985 | ||||||||
| Construct_product | WBCnstr00029985 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction | WBInteraction000445951 | ||||||||
| WBInteraction000503274 | |||||||||
| Map_info | Positive | Positive_clone | W08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 18.272 | |||||||
| Method | Gene |
