WormBase Tree Display for Gene: WBGene00012288
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WBGene00012288 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | sre-32 | Person_evidence | WBPerson522 | |||||
Sequence_name | W05H5.7 | ||||||||
Molecular_name | W05H5.7 | ||||||||
W05H5.7.1 | |||||||||
CE35634 | |||||||||
Other_name | CELE_W05H5.7 | Accession_evidence | NDB | BX284602 | |||||
Public_name | sre-32 | ||||||||
DB_info | Database | AceView | gene | 2M742 | |||||
WormQTL | gene | WBGene00012288 | |||||||
WormFlux | gene | WBGene00012288 | |||||||
NDB | locus_tag | CELE_W05H5.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012288|UniProtKB=P90837 | |||||||
family | PTHR23128 | ||||||||
NCBI | gene | 189227 | |||||||
RefSeq | protein | NM_064249.3 | |||||||
SwissProt | UniProtAcc | P90837 | |||||||
TREEFAM | TREEFAM_ID | TF316213 | |||||||
UniProt_GCRP | UniProtAcc | P90837 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-32 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sre | ||||||||
Allele (49) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00049194 | ||||||||
00049195 | |||||||||
00119435 | |||||||||
00119436 | |||||||||
Ortholog | WBGene00039855 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
OMA | |||||||||
WBGene00054529 | Caenorhabditis remanei | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00193341 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
WBGene00101950 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
Csp11.Scaffold629.g14531 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
FL83_24422 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g6170 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (45) | |||||||||
Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W05H5.7 | |||||||
Corresponding_CDS_history | W05H5.7:wp109 | ||||||||
Corresponding_transcript | W05H5.7.1 | ||||||||
Associated_feature | WBsf990100 | ||||||||
WBsf990101 | |||||||||
WBsf1013436 | |||||||||
Experimental_info | RNAi_result | WBRNAi00036311 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054845 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019634 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr6841 | ||||||||
Expr14043 | |||||||||
Expr1024105 | |||||||||
Expr1158389 | |||||||||
Expr2016283 | |||||||||
Expr2034510 | |||||||||
Drives_construct | WBCnstr00003664 | ||||||||
WBCnstr00030023 | |||||||||
Construct_product | WBCnstr00030023 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (26) | |||||||||
Interaction (113) | |||||||||
Map_info | Map | II | Position | 9.95401 | Error | 0.00935 | |||
Positive | Positive_clone | W05H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |