WormBase Tree Display for Gene: WBGene00012274
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| WBGene00012274 | SMap | S_parent | Sequence | W05B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | W05B5.1 | |||||||
| Molecular_name (21) | |||||||||
| Other_name | CELE_W05B5.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | W05B5.1 | ||||||||
| DB_info | Database | AceView | gene | 1N637 | |||||
| WormQTL | gene | WBGene00012274 | |||||||
| WormFlux | gene | WBGene00012274 | |||||||
| NDB | locus_tag | CELE_W05B5.1 | |||||||
| NCBI | gene | 173177 | |||||||
| RefSeq | protein | NM_001265123.3 | |||||||
| NM_001265118.4 | |||||||||
| NM_001265119.3 | |||||||||
| NM_001265120.2 | |||||||||
| NM_001381238.1 | |||||||||
| NM_001377666.2 | |||||||||
| NM_001265122.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF316570 | |||||||
| TrEMBL | UniProtAcc | F5GUH2 | |||||||
| F5GUG7 | |||||||||
| F5GUH0 | |||||||||
| F5GUH1 | |||||||||
| F5GUG8 | |||||||||
| F5GUG9 | |||||||||
| F5GUG6 | |||||||||
| UniProt_GCRP | UniProtAcc | F5GUH2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Mar 2011 17:27:00 | WBPerson1983 | Event | Acquires_merge | WBGene00044730 | ||||
| Acquires_merge | WBGene00044730 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (233) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by seventeen chemicals including rotenone; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W05B5.1a | |||||||
| W05B5.1b | |||||||||
| W05B5.1c | |||||||||
| W05B5.1d | |||||||||
| W05B5.1e | |||||||||
| W05B5.1f | |||||||||
| W05B5.1g | |||||||||
| Corresponding_CDS_history | W05B5.1:wp225 | ||||||||
| Corresponding_transcript | W05B5.1a.1 | ||||||||
| W05B5.1b.1 | |||||||||
| W05B5.1c.1 | |||||||||
| W05B5.1d.1 | |||||||||
| W05B5.1e.1 | |||||||||
| W05B5.1f.1 | |||||||||
| W05B5.1g.1 | |||||||||
| Other_sequence (58) | |||||||||
| Associated_feature (22) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036298 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000406 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054816 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028416 | ||||||||
| Expr1035435 | |||||||||
| Expr1158357 | |||||||||
| Expr2006796 | |||||||||
| Expr2025021 | |||||||||
| Drives_construct | WBCnstr00030032 | ||||||||
| Construct_product | WBCnstr00030032 | ||||||||
| Microarray_results (38) | |||||||||
| Expression_cluster (155) | |||||||||
| SAGE_tag | SAGE:taaagaagaa | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:tattaattcgactttgc | Strand | Antisense | |||||||
| SAGE:taaagaagaagaagtgc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tattaattcg | Strand | Antisense | |||||||
| Interaction | WBInteraction000031874 | ||||||||
| WBInteraction000565980 | |||||||||
| WBInteraction000576051 | |||||||||
| WBInteraction000580805 | |||||||||
| WBInteraction000583714 | |||||||||
| WBInteraction000584106 | |||||||||
| Map_info | Positive | Positive_clone | W05B5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 17.1154 | |||||||
| Reference | WBPaper00060121 | ||||||||
| Method | Gene |
