WormBase Tree Display for Gene: WBGene00012260
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| WBGene00012260 | SMap | S_parent | Sequence | W04G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W04G3.7 | |||||||
| Molecular_name | W04G3.7 | ||||||||
| W04G3.7.1 | |||||||||
| CE46870 | |||||||||
| Other_name | CELE_W04G3.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | W04G3.7 | ||||||||
| DB_info | Database | AceView | gene | XL700 | |||||
| WormQTL | gene | WBGene00012260 | |||||||
| WormFlux | gene | WBGene00012260 | |||||||
| NDB | locus_tag | CELE_W04G3.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012260|UniProtKB=Q23168 | |||||||
| family | PTHR34228 | ||||||||
| NCBI | gene | 189196 | |||||||
| RefSeq | protein | NM_077455.6 | |||||||
| TREEFAM | TREEFAM_ID | TF353105 | |||||||
| TrEMBL | UniProtAcc | Q23168 | |||||||
| UniProt_GCRP | UniProtAcc | Q23168 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Paralog | WBGene00008100 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00008850 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00009404 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00077565 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019236 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013127 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00044151 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00044152 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00194793 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Enriched in AIZL; AIZR; anterior arcade cell; and arcade cell based on single-cell RNA-seq studies. Is affected by several genes including eat-2; sir-2.1; and clk-1 based on microarray and RNA-seq studies. Is affected by tryptophan; glycine; and Oligosaccharides based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W04G3.7 | |||||||
| Corresponding_CDS_history | W04G3.7:wp229 | ||||||||
| Corresponding_transcript | W04G3.7.1 | ||||||||
| Other_sequence | Oden_isotig14103 | ||||||||
| Oden_isotig14102 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054786 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019604 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017613 | ||||||||
| Expr1158327 | |||||||||
| Expr2006781 | |||||||||
| Expr2025005 | |||||||||
| Drives_construct | WBCnstr00030042 | ||||||||
| Construct_product | WBCnstr00030042 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (47) | |||||||||
| Interaction | WBInteraction000317844 | ||||||||
| WBInteraction000391088 | |||||||||
| WBInteraction000407472 | |||||||||
| Map_info | Positive | Positive_clone | W04G3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 2.85827 | |||||||
| Method | Gene |
