WormBase Tree Display for Gene: WBGene00012211
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WBGene00012211 | SMap | S_parent | Sequence | W02D9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ssp-37 | Person_evidence | WBPerson261 | |||
Sequence_name | W02D9.5 | ||||||
Molecular_name | W02D9.5 | ||||||
W02D9.5.1 | |||||||
CE14462 | |||||||
Other_name | CELE_W02D9.5 | Accession_evidence | NDB | BX284601 | |||
Public_name | ssp-37 | ||||||
DB_info | Database | AceView | gene | 1N154 | |||
WormQTL | gene | WBGene00012211 | |||||
WormFlux | gene | WBGene00012211 | |||||
NDB | locus_tag | CELE_W02D9.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00012211|UniProtKB=Q9XVH1 | |||||
family | PTHR22947 | ||||||
NCBI | gene | 173127 | |||||
RefSeq | protein | NM_060784.5 | |||||
TrEMBL | UniProtAcc | Q9XVH1 | |||||
UniProt_GCRP | UniProtAcc | Q9XVH1 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ssp | ||||||
Allele (14) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00102440 | ||||||
Ortholog (55) | |||||||
Paralog (33) | |||||||
Structured_description | Automated_description | Involved in defense response to Gram-negative bacterium. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | W02D9.5 | |||||
Corresponding_transcript | W02D9.5.1 | ||||||
Associated_feature | WBsf985620 | ||||||
WBsf985621 | |||||||
WBsf1010920 | |||||||
WBsf220436 | |||||||
Experimental_info | RNAi_result | WBRNAi00004383 | Inferred_automatically | RNAi_primary | |||
WBRNAi00036198 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054611 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1026918 | ||||||
Expr1158155 | |||||||
Drives_construct | WBCnstr00030066 | ||||||
Construct_product | WBCnstr00030066 | ||||||
Microarray_results (14) | |||||||
Expression_cluster (149) | |||||||
Interaction (214) | |||||||
Map_info | Map | I | Position | 13.5338 | Error | 0.030815 | |
Positive | Positive_clone | W02D9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00050183 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |