WormBase Tree Display for Gene: WBGene00012140
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| WBGene00012140 | SMap | S_parent | Sequence | T28F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T28F4.5 | |||||||
| Molecular_name | T28F4.5 | ||||||||
| T28F4.5.1 | |||||||||
| CE06527 | |||||||||
| T28F4.5.2 | |||||||||
| Other_name | CELE_T28F4.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T28F4.5 | ||||||||
| DB_info | Database | AceView | gene | 1I69 | |||||
| WormQTL | gene | WBGene00012140 | |||||||
| WormFlux | gene | WBGene00012140 | |||||||
| NDB | locus_tag | CELE_T28F4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012140|UniProtKB=Q22850 | |||||||
| family | PTHR13177 | ||||||||
| NCBI | gene | 172503 | |||||||
| RefSeq | protein | NM_059701.8 | |||||||
| TREEFAM | TREEFAM_ID | TF318830 | |||||||
| TrEMBL | UniProtAcc | Q22850 | |||||||
| UniProt_GCRP | UniProtAcc | Q22850 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076609 | ||||||||
| 00076610 | |||||||||
| 00076611 | |||||||||
| 00076612 | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00010019 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The T28F4.5 gene encodes a homolog of Death Associated Protein 1 (DAP-1) protein that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable death domain binding activity. Predicted to be involved in apoptotic signaling pathway; cellular response to amino acid starvation; and negative regulation of autophagy. Is an ortholog of human DAP (death associated protein). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28F4.5 | |||||||
| Corresponding_transcript | T28F4.5.1 | ||||||||
| T28F4.5.2 | |||||||||
| Other_sequence | CBC04110_1 | ||||||||
| CRC00035_1 | |||||||||
| Tcir_isotig27074 | |||||||||
| CR01683 | |||||||||
| CJC01013_1 | |||||||||
| Associated_feature | WBsf643454 | ||||||||
| WBsf643455 | |||||||||
| WBsf981044 | |||||||||
| WBsf218010 | |||||||||
| WBsf218011 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054444 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036105 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004348 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025397 | ||||||||
| Expr1035369 | |||||||||
| Expr1157988 | |||||||||
| Expr2006634 | |||||||||
| Expr2024851 | |||||||||
| Drives_construct | WBCnstr00030111 | ||||||||
| Construct_product | WBCnstr00030111 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (300) | |||||||||
| Interaction (143) | |||||||||
| Map_info | Positive | Positive_clone | T28F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 2.09689 | |||||||
| Reference | WBPaper00033099 | ||||||||
| Method | Gene |
