WormBase Tree Display for Gene: WBGene00012111
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| WBGene00012111 | SMap | S_parent | Sequence | T28A8 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Allele (15) | ||||||
| RNASeq_FPKM (74) | ||||||
| Contained_in_operon | CEOP3804 | |||||
| Ortholog (18) | ||||||
| Paralog (37) | ||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; germ line; and germline precursor cell based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including rotenone; manganese chloride; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | T28A8.5a | ||||
| T28A8.5b | ||||||
| Corresponding_CDS_history | T28A8.5:wp209 | |||||
| Corresponding_transcript | T28A8.5a.1 | |||||
| T28A8.5b.1 | ||||||
| Associated_feature | WBsf994908 | |||||
| WBsf226030 | ||||||
| Experimental_info | RNAi_result | WBRNAi00019375 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00082455 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00006240 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00054374 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00082650 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1025680 | |||||
| Expr1035351 | ||||||
| Expr1157921 | ||||||
| Expr2006593 | ||||||
| Expr2024810 | ||||||
| Microarray_results | SMD_T28A8.5 | |||||
| 179004_at | ||||||
| Aff_T28A8.5 | ||||||
| GPL19516_CGZ0037373 | ||||||
| GPL21109_T28A8.5 | ||||||
| GPL3518_CE18976 | ||||||
| GPL8673_T28A8_5P00054 | ||||||
| GPL8673_T28A8_5P00325 | ||||||
| Expression_cluster (117) | ||||||
| SAGE_tag | SAGE:atggacaggt | Strand | Sense | |||
| Unambiguously_mapped | ||||||
| SAGE:atggacaggtgaagctc | Strand | Sense | ||||
| Unambiguously_mapped | ||||||
| Interaction (38) | ||||||
| Map_info | Positive | Positive_clone | T28A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |
| Interpolated_map_position | III | 21.2478 | ||||
| Method | Gene |
