WormBase Tree Display for Gene: WBGene00012086
expand all nodes | collapse all nodes | view schema
WBGene00012086 | SMap | S_parent | Sequence | T27D12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-144 | Person_evidence | WBPerson2531 | |||||
Sequence_name | T27D12.3 | ||||||||
Molecular_name | T27D12.3 | ||||||||
T27D12.3.1 | |||||||||
CE46020 | |||||||||
Other_name | CELE_T27D12.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | clec-144 | ||||||||
DB_info | Database | AceView | gene | 2M120 | |||||
WormQTL | gene | WBGene00012086 | |||||||
WormFlux | gene | WBGene00012086 | |||||||
NDB | locus_tag | CELE_T27D12.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012086|UniProtKB=Q22831 | |||||||
family | PTHR23124 | ||||||||
NCBI | gene | 188994 | |||||||
RefSeq | protein | NM_064127.3 | |||||||
TREEFAM | TREEFAM_ID | TF315870 | |||||||
TrEMBL | UniProtAcc | Q22831 | |||||||
UniProt_GCRP | UniProtAcc | Q22831 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-144 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele | WBVar01312509 | ||||||||
WBVar01499702 | |||||||||
WBVar01547215 | |||||||||
WBVar01498613 | |||||||||
WBVar01605166 | |||||||||
WBVar01498435 | |||||||||
WBVar01627322 | |||||||||
WBVar00379227 | |||||||||
WBVar00379228 | |||||||||
WBVar00379229 | |||||||||
WBVar00259001 | |||||||||
WBVar01499986 | |||||||||
WBVar01538763 | |||||||||
WBVar01538764 | |||||||||
WBVar00771615 | |||||||||
WBVar00229878 | |||||||||
WBVar00771616 | |||||||||
WBVar00771617 | |||||||||
WBVar00771618 | |||||||||
WBVar00771619 | |||||||||
WBVar00771620 | |||||||||
WBVar00771621 | |||||||||
WBVar00771622 | |||||||||
WBVar00771623 | |||||||||
WBVar00052457 | |||||||||
WBVar01498941 | |||||||||
WBVar01440260 | |||||||||
WBVar01414002 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (94) | |||||||||
Paralog (126) | |||||||||
Structured_description | Automated_description | Enriched in ABplpaaaaa; ABprpaaaaa; and nerve ring neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Tunicamycin; allantoin; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T27D12.3 | |||||||
Corresponding_CDS_history | T27D12.3:wp225 | ||||||||
Corresponding_transcript | T27D12.3.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00054802 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019609 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036030 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054308 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019330 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022597 | ||||||||
Expr1157852 | |||||||||
Expr2010073 | |||||||||
Expr2028315 | |||||||||
Microarray_results (16) | |||||||||
Expression_cluster (65) | |||||||||
Interaction (69) | |||||||||
Map_info | Map | II | Position | 4.06516 | Error | 0.003128 | |||
Positive | Positive_clone | T27D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064708 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |