WormBase Tree Display for Gene: WBGene00012056
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| WBGene00012056 | SMap | S_parent | Sequence | T26E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-285 | Person_evidence | WBPerson600 | |||||
| WBPerson655 | |||||||||
| Sequence_name | T26E4.16 | ||||||||
| Molecular_name | T26E4.16 | ||||||||
| T26E4.16.1 | |||||||||
| CE35035 | |||||||||
| Other_name | CELE_T26E4.16 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-285 | ||||||||
| DB_info | Database | AceView | gene | 5Q258 | |||||
| WormQTL | gene | WBGene00012056 | |||||||
| WormFlux | gene | WBGene00012056 | |||||||
| NDB | locus_tag | CELE_T26E4.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012056|UniProtKB=Q7YWS6 | |||||||
| family | PTHR45886 | ||||||||
| NCBI | gene | 3565155 | |||||||
| RefSeq | protein | NM_001028989.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315373 | |||||||
| TrEMBL | UniProtAcc | Q7YWS6 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YWS6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Dec 2005 10:23:51 | WBPerson2970 | Name_change | CGC_name | nhr-285 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (25) | |||||||||
| Strain | WBStrain00036682 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082658 | ||||||||
| 00082659 | |||||||||
| 00082660 | |||||||||
| 00082661 | |||||||||
| 00119246 | |||||||||
| 00119247 | |||||||||
| 00119248 | |||||||||
| 00119249 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T26E4.16 | |||||||
| Corresponding_transcript | T26E4.16.1 | ||||||||
| Associated_feature | WBsf235088 | ||||||||
| Transcription_factor | WBTranscriptionFactor000788 | ||||||||
| Experimental_info | Expr_pattern | Expr1025721 | |||||||
| Expr1157756 | |||||||||
| Expr2014173 | |||||||||
| Drives_construct | WBCnstr00030167 | ||||||||
| Construct_product | WBCnstr00030167 | ||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster | WBPaper00037950:hypodermis_L1-larva_expressed | ||||||||
| WBPaper00042194:Tryptophan_upregulated | |||||||||
| WBPaper00045774:clk-1_downregulated | |||||||||
| WBPaper00050370:dpy-21(e428)_L3_downregulated | |||||||||
| WBPaper00050726:OsmoticStress_regulated_Food | |||||||||
| WBPaper00060811:L1_vs_adult_upregulated_neural | |||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| WBPaper00062325:muscle_depleted_coding-RNA | |||||||||
| WBPaper00062520:qui-1(db104)_downregulated | |||||||||
| WBPaper00065841:93_0 | |||||||||
| Map_info | Map | V | Position | 8.86946 | Error | 0.012066 | |||
| Positive | Positive_clone | T26E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
