WormBase Tree Display for Gene: WBGene00012009
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| WBGene00012009 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T25B9.3 | |||||||
| Molecular_name | T25B9.3a | ||||||||
| T25B9.3a.1 | |||||||||
| CE36717 | |||||||||
| T25B9.3b | |||||||||
| CE36718 | |||||||||
| T25B9.3b.1 | |||||||||
| Other_name | CELE_T25B9.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | T25B9.3 | ||||||||
| DB_info | Database | AceView | gene | 4L513 | |||||
| WormQTL | gene | WBGene00012009 | |||||||
| WormFlux | gene | WBGene00012009 | |||||||
| NDB | locus_tag | CELE_T25B9.3 | |||||||
| NCBI | gene | 188881 | |||||||
| RefSeq | protein | NM_001028232.3 | |||||||
| NM_001028231.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF316617 | |||||||
| TrEMBL | UniProtAcc | Q6BET9 | |||||||
| G5EF20 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EF20 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (54) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including cholinergic neurons; head mesodermal cell; head neurons; rectal epithelial cell; and rectum based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; pmk-1; and lin-35 based on microarray and RNA-seq studies. Is affected by seven chemicals including Psoralens; Sirolimus; and Cry5B based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T25B9.3a | |||||||
| T25B9.3b | |||||||||
| Corresponding_CDS_history | T25B9.3:wp126 | ||||||||
| Corresponding_transcript | T25B9.3a.1 | ||||||||
| T25B9.3b.1 | |||||||||
| Other_sequence | Acan_isotig11515 | ||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035951 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054108 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018645 | ||||||||
| Expr1035309 | |||||||||
| Expr1157652 | |||||||||
| Expr2006488 | |||||||||
| Expr2024707 | |||||||||
| Drives_construct | WBCnstr00030205 | ||||||||
| Construct_product | WBCnstr00030205 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction | WBInteraction000182289 | ||||||||
| WBInteraction000277041 | |||||||||
| WBInteraction000291107 | |||||||||
| WBInteraction000294493 | |||||||||
| WBInteraction000366919 | |||||||||
| WBInteraction000454563 | |||||||||
| WBInteraction000458136 | |||||||||
| WBInteraction000570660 | |||||||||
| Map_info | Positive | Positive_clone | T25B9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.69142 | |||||||
| Method | Gene |
