WormBase Tree Display for Gene: WBGene00012007

WBGene00012007 SMap: S_parent: Sequence: T25B9
  Identity: Version: 1
    Name: Sequence_name: T25B9.1
      Molecular_name: T25B9.1
        T25B9.1.1
        CE52909
      Other_name: CELE_T25B9.1 Accession_evidence: NDB BX284604
      Public_name: T25B9.1
    DB_info: Database: AceView gene 4L514
        WormQTL gene WBGene00012007
        WormFlux gene WBGene00012007
        NDB locus_tag CELE_T25B9.1
        Panther gene CAEEL|WormBase=WBGene00012007|UniProtKB=Q22768
          family PTHR13693
        NCBI gene 177968
        RefSeq protein NM_069590.8
        TREEFAM TREEFAM_ID TF105923
        TrEMBL UniProtAcc Q22768
        UniProt_GCRP UniProtAcc Q22768
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (22)
    RNASeq_FPKM (74)
    GO_annotation: 00076357
      00076358
      00076359
      00119196
      00119197
      00119198
      00119199
    Ortholog (36)
    Paralog: WBGene00011932 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016020 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018398 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: T25B9.1 encodes an protein highly similar to 2-amino-3-keto-butyrate coenzyme A ligases (also called AKB ligases or glycine acetyltransferases; EC 2.3.1.29; R.W. Paper_evidence: WBPaper00004424
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable glycine C-acetyltransferase activity; pyridoxal phosphate binding activity; and transaminase activity. Predicted to be involved in biosynthetic process and threonine catabolic process. Predicted to be located in mitochondrion. Is an ortholog of human GCAT (glycine C-acetyltransferase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T25B9.1
    Corresponding_CDS_history: T25B9.1:wp109
      T25B9.1:wp268
    Corresponding_transcript: T25B9.1.1
    Other_sequence (61)
    Associated_feature: WBsf652154
      WBsf230770
  Experimental_info: RNAi_result: WBRNAi00114482 Inferred_automatically: RNAi_primary
      WBRNAi00114480 Inferred_automatically: RNAi_primary
      WBRNAi00113713 Inferred_automatically: RNAi_primary
      WBRNAi00054103 Inferred_automatically: RNAi_primary
      WBRNAi00113709 Inferred_automatically: RNAi_primary
      WBRNAi00035949 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022294
      Expr1035308
      Expr1157647
      Expr2006487
      Expr2024705
    Drives_construct: WBCnstr00030206
    Construct_product: WBCnstr00030206
    Microarray_results (18)
    Expression_cluster (189)
    Interaction: WBInteraction000041827
      WBInteraction000112264
      WBInteraction000112564
      WBInteraction000115037
      WBInteraction000118454
      WBInteraction000119400
      WBInteraction000134626
      WBInteraction000139816
      WBInteraction000144525
      WBInteraction000159956
      WBInteraction000165273
      WBInteraction000171806
      WBInteraction000174532
      WBInteraction000175471
      WBInteraction000188034
      WBInteraction000190286
      WBInteraction000202979
      WBInteraction000205472
      WBInteraction000208901
      WBInteraction000223091
      WBInteraction000224064
      WBInteraction000225359
      WBInteraction000238080
      WBInteraction000247647
      WBInteraction000253026
      WBInteraction000265391
      WBInteraction000267012
      WBInteraction000267014
      WBInteraction000282052
      WBInteraction000282971
      WBInteraction000293193
      WBInteraction000296263
      WBInteraction000302375
      WBInteraction000302433
      WBInteraction000309359
      WBInteraction000316893
      WBInteraction000334012
      WBInteraction000334013
      WBInteraction000346737
      WBInteraction000368731
      WBInteraction000368732
      WBInteraction000368733
      WBInteraction000369407
      WBInteraction000373847
      WBInteraction000377850
      WBInteraction000378470
      WBInteraction000381336
      WBInteraction000383349
      WBInteraction000386012
      WBInteraction000392746
      WBInteraction000393350
      WBInteraction000393424
      WBInteraction000399213
      WBInteraction000407501
      WBInteraction000408239
      WBInteraction000416593
      WBInteraction000419507
      WBInteraction000420325
      WBInteraction000420735
      WBInteraction000442050
      WBInteraction000457341
      WBInteraction000463695
      WBInteraction000465136
      WBInteraction000465237
      WBInteraction000466381
      WBInteraction000467157
      WBInteraction000467215
      WBInteraction000469462
      WBInteraction000472229
      WBInteraction000474279
      WBInteraction000564322
      WBInteraction000570864
  Map_info: Positive: Positive_clone: T25B9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 4.69179
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene