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WormBase Tree Display for Gene: WBGene00011962

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Name Class

WBGene00011962SMapS_parentSequenceT23G5
IdentityVersion1
NameSequence_nameT23G5.2
Molecular_nameT23G5.2a
T23G5.2a.1
CE39782
T23G5.2b
CE39783
T23G5.2b.1
Other_nameCELE_T23G5.2Accession_evidenceNDBBX284603
Public_nameT23G5.2
DB_infoDatabaseAceViewgene3K322
WormQTLgeneWBGene00011962
WormFluxgeneWBGene00011962
NDBlocus_tagCELE_T23G5.2
PanthergeneCAEEL|WormBase=WBGene00011962|UniProtKB=Q03606
familyPTHR23324
NCBIgene176302
RefSeqproteinNM_001047411.5
NM_001047410.8
SwissProtUniProtAccQ03606
TREEFAMTREEFAM_IDTF313988
UniProt_GCRPUniProtAccQ03606
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (75)
RNASeq_FPKM (74)
GO_annotation00052473
00119164
OrthologWBGene00055140Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00031612Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00147223Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00126860Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00226219Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g4289Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16165Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7203Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20112Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3321Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17659Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8555Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7027Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1495Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g15663Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23851Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9064Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-T23G5.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold592.g5146Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold592.g5147Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00126.g5030Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00126.g5031Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07461Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009386Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07514Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2252Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30264300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8573Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00212520Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241956Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00109923Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00266661Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289794Trichuris murisFrom_analysisWormBase-Compara
SGD:S000001574Saccharomyces cerevisiaeFrom_analysisOrthoInspector
SonicParanoid
SGD:S000004684Saccharomyces cerevisiaeFrom_analysisOrthoInspector
SonicParanoid
FB:FBgn0031814Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040426-801Danio rerioFrom_analysisHieranoid
OMA
OrthoFinder
Panther
PhylomeDB
ZFIN:ZDB-GENE-060503-441Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:10698Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:29032Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1921386Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:3616084Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1564638Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1563123Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to be located in cytoplasm. Is an ortholog of human SEC14L5 (SEC14 like lipid binding 5).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST23G5.2a
T23G5.2b
Corresponding_CDS_historyT23G5.2:wp154
Corresponding_transcriptT23G5.2a.1
T23G5.2b.1
Other_sequence (38)
Associated_featureWBsf667249
WBsf993618
WBsf993619
WBsf1015570
WBsf227262
WBsf227263
WBsf227264
Experimental_infoRNAi_resultWBRNAi00019104Inferred_automaticallyRNAi_primary
WBRNAi00076705Inferred_automaticallyRNAi_primary
WBRNAi00006045Inferred_automaticallyRNAi_primary
WBRNAi00002165Inferred_automaticallyRNAi_primary
WBRNAi00053976Inferred_automaticallyRNAi_primary
Expr_patternChronogram213
Chronogram254
Chronogram263
Expr6753
Expr1028529
Expr1035281
Expr1157522
Expr2006425
Expr2024645
Drives_constructWBCnstr00002543
WBCnstr00030247
Construct_productWBCnstr00030247
Microarray_results (29)
Expression_cluster (123)
Interaction (73)
Map_infoPositivePositive_cloneT23G5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII0.334958
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00063976
MethodGene