WormBase Tree Display for Gene: WBGene00011902
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| WBGene00011902 | SMap | S_parent | Sequence | T21E8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | T21E8.4 | |||||||
| Molecular_name | T21E8.4 | ||||||||
| T21E8.4.1 | |||||||||
| CE43206 | |||||||||
| Other_name | CELE_T21E8.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T21E8.4 | ||||||||
| DB_info | Database | AceView | gene | XL503 | |||||
| WormQTL | gene | WBGene00011902 | |||||||
| WormFlux | gene | WBGene00011902 | |||||||
| NDB | locus_tag | CELE_T21E8.4 | |||||||
| NCBI | gene | 188698 | |||||||
| RefSeq | protein | NM_077413.4 | |||||||
| TREEFAM | TREEFAM_ID | TF344205 | |||||||
| TrEMBL | UniProtAcc | Q22653 | |||||||
| UniProt_GCRP | UniProtAcc | Q22653 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Oct 2008 11:52:29 | WBPerson1983 | Event | Split_into | WBGene00164972 | ||||
| Split_into | WBGene00164972 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00037159 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00037160 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00144982 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00079616 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00139801 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold629.g13819 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| FL83_01248 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_023654 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_X0077200 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g19959 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00164972 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Enriched in Z1; Z4; coelomocyte; intestine; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including eat-2; hpl-2; and spr-5 based on microarray; tiling array; and RNA-seq studies. Is affected by four chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T21E8.4 | |||||||
| Corresponding_CDS_history | T21E8.4:wp196 | ||||||||
| Corresponding_transcript | T21E8.4.1 | ||||||||
| Experimental_info | Expr_pattern | Expr1022735 | |||||||
| Expr1157299 | |||||||||
| Expr2006328 | |||||||||
| Expr2024548 | |||||||||
| Drives_construct | WBCnstr00030298 | ||||||||
| Construct_product | WBCnstr00030298 | ||||||||
| Microarray_results | GPL14144_T21E8.4_302-361_0.942_6_A | ||||||||
| GPL19516_CGZ0035923 | |||||||||
| GPL21109_T21E8.4 | |||||||||
| Expression_cluster (31) | |||||||||
| Interaction | WBInteraction000126668 | ||||||||
| WBInteraction000207204 | |||||||||
| WBInteraction000238994 | |||||||||
| WBInteraction000271658 | |||||||||
| WBInteraction000358918 | |||||||||
| WBInteraction000380274 | |||||||||
| WBInteraction000403133 | |||||||||
| Map_info | Positive | Positive_clone | T21E8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 2.67311 | |||||||
| Method | Gene |
