WormBase Tree Display for Gene: WBGene00011859
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| WBGene00011859 | SMap | S_parent | Sequence | T20D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T20D3.6 | |||||||
| Molecular_name | T20D3.6a | ||||||||
| T20D3.6a.1 | |||||||||
| CE03674 | |||||||||
| T20D3.6b | |||||||||
| CE48453 | |||||||||
| T20D3.6b.1 | |||||||||
| Other_name | CELE_T20D3.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | T20D3.6 | ||||||||
| DB_info | Database | AceView | gene | 4K102 | |||||
| WormQTL | gene | WBGene00011859 | |||||||
| WormFlux | gene | WBGene00011859 | |||||||
| NDB | locus_tag | CELE_T20D3.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011859|UniProtKB=O01257 | |||||||
| family | PTHR12297 | ||||||||
| NCBI | gene | 177762 | |||||||
| RefSeq | protein | NM_001306916.3 | |||||||
| NM_069242.5 | |||||||||
| TrEMBL | UniProtAcc | S6F503 | |||||||
| O01257 | |||||||||
| UniProt_GCRP | UniProtAcc | O01257 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024441 | ||||||||
| 00024442 | |||||||||
| 00024443 | |||||||||
| 00024444 | |||||||||
| Contained_in_operon | CEOP4328 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00010878 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in mitochondrial respirasome assembly. Located in cytoplasm. Is an ortholog of human HIGD2A (HIG1 hypoxia inducible domain family member 2A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T20D3.6a | |||||||
| T20D3.6b | |||||||||
| Corresponding_transcript | T20D3.6a.1 | ||||||||
| T20D3.6b.1 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf230555 | ||||||||
| WBsf230556 | |||||||||
| WBsf230557 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00078329 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00081683 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018903 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053615 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035702 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9576 | ||||||||
| Expr1011815 | |||||||||
| Expr1035225 | |||||||||
| Expr1157173 | |||||||||
| Expr2006287 | |||||||||
| Expr2024504 | |||||||||
| Drives_construct | WBCnstr00030329 | ||||||||
| Construct_product | WBCnstr00014141 | ||||||||
| WBCnstr00030329 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (75) | |||||||||
| Interaction | WBInteraction000050679 | ||||||||
| WBInteraction000220655 | |||||||||
| WBInteraction000353514 | |||||||||
| Map_info | Positive | Positive_clone | T20D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.18686 | |||||||
| Reference | WBPaper00028564 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Method | Gene |
