WormBase Tree Display for Gene: WBGene00011836

WBGene00011836 SMap: S_parent: Sequence: T19B10
  Identity: Version: 2
    Name: CGC_name: mam-4 Person_evidence: WBPerson3379
      Sequence_name: T19B10.9
      Molecular_name: T19B10.9
        T19B10.9.1
        CE16416
      Other_name: CELE_T19B10.9 Accession_evidence: NDB BX284605
      Public_name: mam-4
    DB_info: Database: AceView gene 5L729
        WormQTL gene WBGene00011836
        WormFlux gene WBGene00011836
        NDB locus_tag CELE_T19B10.9
        NCBI gene 179558
        RefSeq protein NM_073456.4
        TREEFAM TREEFAM_ID TF317172
        TrEMBL UniProtAcc Q22563
        UniProt_GCRP UniProtAcc Q22563
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Dec 2011 12:14:43 WBPerson2970 Name_change: CGC_name: mam-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mam
    Allele (32)
    RNASeq_FPKM (74)
    Ortholog (21)
    Paralog: WBGene00022504 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00008150 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008605 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009593 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010359 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010714 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00011572 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019866 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044542 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in ABplpaaaaa; ABprpaaaaa; interfacial epithelial cell; and rectal gland cell based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by eight chemicals including methylmercury hydroxide; manganese chloride; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Concanavalin A-like lectin/glucanase domain superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T19B10.9
    Corresponding_transcript: T19B10.9.1
    Other_sequence: Dviv_isotig32590
    Associated_feature: WBsf232487
  Experimental_info: RNAi_result: WBRNAi00053498 Inferred_automatically: RNAi_primary
      WBRNAi00000996 Inferred_automatically: RNAi_primary
      WBRNAi00035651 Inferred_automatically: RNAi_primary
      WBRNAi00085709 Inferred_automatically: RNAi_primary
      WBRNAi00018822 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025179
      Expr1035218
      Expr1157064
      Expr2013364
      Expr2031596
    Drives_construct: WBCnstr00030346
    Construct_product: WBCnstr00030346
    Microarray_results (19)
    Expression_cluster (140)
    Interaction: WBInteraction000214641
      WBInteraction000272292
      WBInteraction000297007
      WBInteraction000391703
      WBInteraction000394257
      WBInteraction000439052
  Map_info: Map: V Position: 3.01602
    Positive: Positive_clone: T19B10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene