WormBase Tree Display for Gene: WBGene00011833
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| WBGene00011833 | SMap | S_parent | Sequence | T19B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T19B10.5 | |||||||
| Molecular_name | T19B10.5 | ||||||||
| T19B10.5.1 | |||||||||
| CE47776 | |||||||||
| Other_name | CELE_T19B10.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T19B10.5 | ||||||||
| DB_info | Database | AceView | gene | 5L717 | |||||
| WormQTL | gene | WBGene00011833 | |||||||
| WormFlux | gene | WBGene00011833 | |||||||
| NDB | locus_tag | CELE_T19B10.5 | |||||||
| NCBI | gene | 179553 | |||||||
| RefSeq | protein | NM_073451.8 | |||||||
| TREEFAM | TREEFAM_ID | TF319364 | |||||||
| TrEMBL | UniProtAcc | Q22559 | |||||||
| UniProt_GCRP | UniProtAcc | Q22559 | |||||||
| OMIM | gene | 605725 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00075625 | ||||||||
| 00075626 | |||||||||
| 00075627 | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Concise_description | T19B10.5 encodes a protein with partial similarity to human PERIAXIN (PRX; OMIM:605725), which when mutated leads to Dejerine-Sottas neuropathy. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 3 and Charcot-Marie-Tooth disease type 4F. Is an ortholog of human AHNAK2 (AHNAK nucleoprotein 2) and PRX (periaxin). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050540 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13797) | ||||
| DOID:0110193 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13797) | ||||||
| Molecular_info | Corresponding_CDS | T19B10.5 | |||||||
| Corresponding_CDS_history | T19B10.5:wp152 | ||||||||
| T19B10.5:wp233 | |||||||||
| Corresponding_transcript | T19B10.5.1 | ||||||||
| Other_sequence | SR01767 | ||||||||
| Tcir_isotig12547 | |||||||||
| CJC00231_1 | |||||||||
| SRC02075_1 | |||||||||
| Dviv_isotig28451 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018819 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053494 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001156 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035648 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012540 | ||||||||
| Expr1035215 | |||||||||
| Expr1157060 | |||||||||
| Expr2006241 | |||||||||
| Expr2024459 | |||||||||
| Drives_construct | WBCnstr00030349 | ||||||||
| Construct_product | WBCnstr00030349 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (168) | |||||||||
| Interaction | WBInteraction000357615 | ||||||||
| WBInteraction000544290 | |||||||||
| WBInteraction000544492 | |||||||||
| WBInteraction000544493 | |||||||||
| WBInteraction000544494 | |||||||||
| Map_info | Positive | Positive_clone | T19B10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 2.98597 | |||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00065080 | |||||||||
| Method | Gene |
