WormBase Tree Display for Gene: WBGene00011796

WBGene00011796 SMap: S_parent: Sequence: T16G1
  Identity: Version: 1
    Name: Sequence_name: T16G1.2
      Molecular_name: T16G1.2a
        T16G1.2a.1
        CE20072
        T16G1.2b
        CE44167
        T16G1.2b.1
      Other_name: CELE_T16G1.2 Accession_evidence: NDB BX284605
      Public_name: T16G1.2
    DB_info: Database: AceView gene 5N411
        WormQTL gene WBGene00011796
        WormFlux gene WBGene00011796
        NDB locus_tag CELE_T16G1.2
        NCBI gene 188552
        RefSeq protein NM_001269539.3
            NM_001269540.1
        TREEFAM TREEFAM_ID TF350655
        TrEMBL UniProtAcc Q9XUP9
            C9IY39
        UniProt_GCRP UniProtAcc Q9XUP9
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (58)
    RNASeq_FPKM (74)
    Ortholog: WBGene00192695 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00031069 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00059034 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135341 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00102145 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00217786 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226070 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1148 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g16128 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20095 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3109 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5767 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18638 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17542 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g8118 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9480 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00220.g7295 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10803 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00409.g10952 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07695 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017642 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50277000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16133 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243675 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ALA; hypodermis; interfacial epithelial cell; mechanosensory neurons; and somatic gonad precursor based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including 1-methylnicotinamide; D-glucose; and stavudine based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T16G1.2a
      T16G1.2b
    Corresponding_transcript: T16G1.2a.1
      T16G1.2b.1
    Other_sequence (3)
    Associated_feature: WBsf1001670
      WBsf1020628
      WBsf232717
  Experimental_info: RNAi_result: WBRNAi00035610 Inferred_automatically: RNAi_primary
      WBRNAi00018768 Inferred_automatically: RNAi_primary
      WBRNAi00053412 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028456
      Expr1035194
      Expr1156987
      Expr2006208
      Expr2024425
    Drives_construct: WBCnstr00030381
    Construct_product: WBCnstr00030381
    Microarray_results (21)
    Expression_cluster (170)
    Interaction (170)
  Map_info: Positive: Positive_clone: T16G1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 4.73912
  Method: Gene