WormBase Tree Display for Gene: WBGene00011790
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| WBGene00011790 | SMap | S_parent | Sequence | T15H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T15H9.5 | |||||||
| Molecular_name | T15H9.5 | ||||||||
| T15H9.5.1 | |||||||||
| CE01668 | |||||||||
| Other_name | CELE_T15H9.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T15H9.5 | ||||||||
| DB_info | Database | AceView | gene | 2J900 | |||||
| WormQTL | gene | WBGene00011790 | |||||||
| WormFlux | gene | WBGene00011790 | |||||||
| NDB | locus_tag | CELE_T15H9.5 | |||||||
| NCBI | gene | 188541 | |||||||
| RefSeq | protein | NM_063667.3 | |||||||
| SwissProt | UniProtAcc | Q09355 | |||||||
| UniProt_GCRP | UniProtAcc | Q09355 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00146639 | Caenorhabditis brenneri | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WBGene00078021 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WBGene00085907 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| chrII_pilon.g5543 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00008650 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including MSaapaapa; amphid sheath cell; neurons; pharyngeal gland cell; and ventral nerve cord based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; D-glucose; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T15H9.5 | |||||||
| Corresponding_transcript | T15H9.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00035600 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053390 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018748 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017692 | ||||||||
| Expr1156967 | |||||||||
| Expr2006201 | |||||||||
| Expr2024417 | |||||||||
| Drives_construct | WBCnstr00030384 | ||||||||
| Construct_product | WBCnstr00030384 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction | WBInteraction000207509 | ||||||||
| WBInteraction000256151 | |||||||||
| WBInteraction000292846 | |||||||||
| WBInteraction000303032 | |||||||||
| WBInteraction000315614 | |||||||||
| WBInteraction000325237 | |||||||||
| WBInteraction000403426 | |||||||||
| WBInteraction000404055 | |||||||||
| WBInteraction000430825 | |||||||||
| WBInteraction000448750 | |||||||||
| Map_info | Positive | Positive_clone | T15H9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 1.61723 | |||||||
| Method | Gene |
