WormBase Tree Display for Gene: WBGene00011773

WBGene00011773 SMap: S_parent: Sequence: T14G10
  Identity: Version: 2
    Name: CGC_name: ttr-53
      Sequence_name: T14G10.3
      Molecular_name: T14G10.3
        T14G10.3.1
        CE35618
      Other_name: CELE_T14G10.3 Accession_evidence: NDB BX284604
      Public_name: ttr-53
    DB_info: Database: AceView gene 4K923
        WormQTL gene WBGene00011773
        WormFlux gene WBGene00011773
        NDB locus_tag CELE_T14G10.3
        Panther gene CAEEL|WormBase=WBGene00011773|UniProtKB=Q22500
          family PTHR21700
        NCBI gene 177892
        RefSeq protein NM_069455.4
        TREEFAM TREEFAM_ID TF318551
        TrEMBL UniProtAcc Q22500
        UniProt_GCRP UniProtAcc Q22500
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Sep 2007 11:48:01 WBPerson2970 Name_change: CGC_name: ttr-53
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (12)
    RNASeq_FPKM (74)
    GO_annotation: 00075436
      00119005
    Contained_in_operon: CEOP4619
    Ortholog: WBGene00026274 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065656 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00132346 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00226057 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8419 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g42 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g11367 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2538 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22096 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20128 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2320 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6782 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22137 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6499 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13090 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00734.g13779 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ttr-53 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold585.g4787 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00074.g3443 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16425 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014369 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03081 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11325 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40258300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11527 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241586 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304541 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (62)
    Structured_description: Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T14G10.3
    Corresponding_CDS_history: T14G10.3:wp109
    Corresponding_transcript: T14G10.3.1
    Other_sequence (48)
    Associated_feature: WBsf976940
      WBsf976941
      WBsf976942
      WBsf228945
      WBsf228946
      WBsf228947
      WBsf228948
  Experimental_info: RNAi_result: WBRNAi00035571 Inferred_automatically: RNAi_primary
      WBRNAi00018717 Inferred_automatically: RNAi_primary
      WBRNAi00053332 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017587
      Expr1035185
      Expr1156918
      Expr2017620
      Expr2035758
    Drives_construct: WBCnstr00030400
    Construct_product: WBCnstr00030400
    Microarray_results (20)
    Expression_cluster (109)
    Interaction (16)
  Map_info: Map: IV Position: 4.55006 Error: 0.000724
    Positive: Positive_clone: T14G10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene