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WormBase Tree Display for Gene: WBGene00011757

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Name Class

WBGene00011757SMapS_parentSequenceT13H5
IdentityVersion2
NameCGC_namecht-2Person_evidenceWBPerson261
Sequence_nameT13H5.3
Molecular_nameT13H5.3
T13H5.3.1
CE36953
Other_nameCELE_T13H5.3Accession_evidenceNDBBX284602
Public_namecht-2
DB_infoDatabaseAceViewgene2I813
WormQTLgeneWBGene00011757
WormFluxgeneWBGene00011757
NDBlocus_tagCELE_T13H5.3
PanthergeneCAEEL|WormBase=WBGene00011757|UniProtKB=Q22468
familyPTHR46073
NCBIgene174363
RefSeqproteinNM_063397.5
TrEMBLUniProtAccQ22468
UniProt_GCRPUniProtAccQ22468
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
225 Jan 2013 14:30:54WBPerson2970Name_changeCGC_namecht-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcht
Allele (40)
RNASeq_FPKM (74)
GO_annotation00075301
00075302
00075303
00075304
00118991
00118992
OrthologWBGene00027365Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00053908Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00151231Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00112910Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00185034Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00137379Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00231000Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7368Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g508Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16284Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8959Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21884Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16770Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12543Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g12771Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15975Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4871Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12847Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g12848Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00126.g5070Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00126.g5075Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cht-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21369Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01172.g18986Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04589Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004959Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02204Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2135Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20132000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5272Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00249377Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00292959Trichuris murisFrom_analysisWormBase-Compara
WBGene00296698Trichuris murisFrom_analysisWormBase-Compara
WBGene00296700Trichuris murisFrom_analysisWormBase-Compara
WBGene00296944Trichuris murisFrom_analysisWormBase-Compara
WBGene00296945Trichuris murisFrom_analysisWormBase-Compara
WBGene00300943Trichuris murisFrom_analysisWormBase-Compara
SGD:S000002779Saccharomyces cerevisiaeFrom_analysisInparanoid
OrthoFinder
SonicParanoid
Paralog (38)
Structured_descriptionAutomated_descriptionPredicted to enable chitin binding activity and hydrolase activity, acting on glycosyl bonds. Predicted to be involved in carbohydrate metabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST13H5.3
Corresponding_CDS_historyT13H5.3:wp127
Corresponding_transcriptT13H5.3.1
Other_sequenceDviv_isotig12527
Dviv_isotig12526
Dviv_isotig12528
Associated_featureWBsf644476
WBsf988756
WBsf988757
WBsf221762
Experimental_infoRNAi_resultWBRNAi00022445Inferred_automaticallyRNAi_primary
WBRNAi00001822Inferred_automaticallyRNAi_primary
WBRNAi00053297Inferred_automaticallyRNAi_primary
Expr_patternExpr1023315
Expr1035174
Expr1156883
Expr2010003
Expr2028244
Drives_constructWBCnstr00030412
Construct_productWBCnstr00030412
Microarray_results (19)
Expression_cluster (149)
Interaction (119)
Map_infoMapIIPosition0.814696
PositivePositive_cloneT13H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00064648
WBPaper00065080
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene