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WormBase Tree Display for Gene: WBGene00011756

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Name Class

WBGene00011756SMapS_parentSequenceT13H5
IdentityVersion2
NameCGC_namectg-2Person_evidenceWBPerson3094
Sequence_nameT13H5.2
Molecular_nameT13H5.2a
T13H5.2a.1
CE28959
T13H5.2b
CE43396
T13H5.2b.1
Other_nameCELE_T13H5.2Accession_evidenceNDBBX284602
Public_namectg-2
DB_infoDatabaseAceViewgene2I805
WormQTLgeneWBGene00011756
WormFluxgeneWBGene00011756
NDBlocus_tagCELE_T13H5.2
PanthergeneCAEEL|WormBase=WBGene00011756|UniProtKB=Q22467
familyPTHR23324
NCBIgene174360
RefSeqproteinNM_001381528.1
NM_001267227.3
TREEFAMTREEFAM_IDTF313988
TrEMBLUniProtAccQ22467
B7WN92
UniProt_GCRPUniProtAccQ22467
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
217 Mar 2006 15:11:54WBPerson2970Name_changeCGC_namectg-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classctg
Allele (32)
StrainWBStrain00031551
RNASeq_FPKM (74)
GO_annotation00006505
OrthologWBGene00053905Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00027368Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00143729Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00113388Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00137852Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00226299Brugia malayiFrom_analysisWormBase-Compara
WBGene00268706Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7229Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10914Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3172Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10291Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21881Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16773Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12541Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15982Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4868Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12844Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-ctg-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21358Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01172.g18983Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04587Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004962Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11053Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11055Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21997Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20132210Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5269Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00214241Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216962Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00239910Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239912Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246952Onchocerca volvulusFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-060526-180Danio rerioFrom_analysisOMA
Panther
PhylomeDB
HGNC:10699Homo sapiensFrom_analysisOMA
Panther
PhylomeDB
HGNC:18655Homo sapiensFrom_analysisOMA
Panther
PhylomeDB
HGNC:20627Homo sapiensFrom_analysisOMA
Panther
PhylomeDB
HGNC:40047Homo sapiensFrom_analysisOMA
Panther
PhylomeDB
MGI:1915065Mus musculusFrom_analysisOMA
Panther
PhylomeDB
MGI:3617848Mus musculusFrom_analysisOMA
Panther
PhylomeDB
RGD:620812Rattus norvegicusFrom_analysisOMA
Panther
PhylomeDB
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to be located in cytoplasm. Is an ortholog of several human genes including SEC14L2 (SEC14 like lipid binding 2); SEC14L3 (SEC14 like lipid binding 3); and SEC14L4 (SEC14 like lipid binding 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST13H5.2a
T13H5.2b
Corresponding_CDS_historyT13H5.2:wp60
Corresponding_transcriptT13H5.2a.1
T13H5.2b.1
Other_sequence (31)
Associated_featureWBsf644474
WBsf657978
WBsf717732
WBsf717733
WBsf988754
WBsf221757
WBsf221758
Experimental_infoRNAi_resultWBRNAi00053301Inferred_automaticallyRNAi_primary
WBRNAi00053296Inferred_automaticallyRNAi_primary
Expr_patternExpr1025487
Expr1035173
Expr1156882
Expr2010572
Expr2028812
Drives_constructWBCnstr00030413
Construct_productWBCnstr00030413
Microarray_results (18)
Expression_cluster (168)
Interaction (24)
Map_infoMapIIPosition0.814125Error0.000266
PositivePositive_cloneT13H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene