WormBase Tree Display for Gene: WBGene00011731
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| WBGene00011731 | SMap | S_parent | Sequence | T12D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | acbp-5 | Person_evidence | WBPerson344 | |||||
| WBPerson4367 | |||||||||
| Sequence_name | T12D8.3 | ||||||||
| Molecular_name | T12D8.3 | ||||||||
| T12D8.3.1 | |||||||||
| CE37145 | |||||||||
| T12D8.3.2 | |||||||||
| Other_name | CELE_T12D8.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | acbp-5 | ||||||||
| DB_info | Database | AceView | gene | 3O730 | |||||
| WormQTL | gene | WBGene00011731 | |||||||
| WormFlux | gene | WBGene00011731 | |||||||
| NDB | locus_tag | CELE_T12D8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011731|UniProtKB=Q9XVJ0 | |||||||
| family | PTHR24119 | ||||||||
| NCBI | gene | 176800 | |||||||
| RefSeq | protein | NM_067416.7 | |||||||
| TREEFAM | TREEFAM_ID | TF329102 | |||||||
| TrEMBL | UniProtAcc | Q9XVJ0 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVJ0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2004 10:27:05 | WBPerson1983 | Event | Split_from | WBGene00023450 | ||||
| 3 | 21 Sep 2006 11:29:49 | WBPerson1847 | Name_change | CGC_name | acbp-5 | ||||
| Split_into | WBGene00023450 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acbp | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00032162 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102529 | ||||||||
| 00118969 | |||||||||
| Contained_in_operon | CEOP3818 | ||||||||
| Ortholog (32) | |||||||||
| Structured_description | Concise_description | acbp-5 encodes a highly conserved protein containing a functional acyl-CoA-binding binding domain required for protein stability and ligand binding; contains two ankyrin repeats which may mediate interactions with other proteins; Disruption of ACBP-5 function results in 1.4 times more lipid droplets than in wildtype; ACBP-5 localizes in adult pharynx and intestine with highest expression in anterior part of the intestine. | Paper_evidence | WBPaper00038378 | |||||
| Curator_confirmed | WBPerson12884 | ||||||||
| Date_last_updated | 13 May 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable fatty-acyl-CoA binding activity. Expressed in intestine and pharynx. Is an ortholog of human ACBD6 (acyl-CoA binding domain containing 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T12D8.3 | |||||||
| Corresponding_CDS_history | T12D8.3:wp129 | ||||||||
| Corresponding_transcript | T12D8.3.1 | ||||||||
| T12D8.3.2 | |||||||||
| Other_sequence | CBC05003_1 | ||||||||
| Hbac_isotig01648 | |||||||||
| Associated_feature | WBsf667614 | ||||||||
| WBsf667615 | |||||||||
| WBsf667616 | |||||||||
| WBsf994957 | |||||||||
| WBsf994958 | |||||||||
| WBsf994959 | |||||||||
| WBsf1016423 | |||||||||
| WBsf227778 | |||||||||
| WBsf227779 | |||||||||
| WBsf227780 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006325 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053202 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13623 | ||||||||
| Expr1024183 | |||||||||
| Expr1035157 | |||||||||
| Expr1156793 | |||||||||
| Expr2009117 | |||||||||
| Expr2027354 | |||||||||
| Drives_construct | WBCnstr00030433 | ||||||||
| WBCnstr00039886 | |||||||||
| Construct_product | WBCnstr00030433 | ||||||||
| WBCnstr00039886 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (59) | |||||||||
| Map_info | Map | III | Position | 21.3131 | Error | 0.002391 | |||
| Positive | Positive_clone | T12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
