WormBase Tree Display for Gene: WBGene00011713

WBGene00011713 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 2
    Name: CGC_name: htrl-1 Person_evidence: WBPerson260
      Sequence_name: T11F9.12
      Molecular_name: T11F9.12
        T11F9.12.1
        CE44974
      Other_name: CELE_T11F9.12 Accession_evidence: NDB BX284605
      Public_name: htrl-1
    DB_info: Database: AceView gene 5L974
        WormQTL gene WBGene00011713
        WormFlux gene WBGene00011713
        NDB locus_tag CELE_T11F9.12
        Panther gene CAEEL|WormBase=WBGene00011713|UniProtKB=G5EDH2
          family PTHR21579
        NCBI gene 179579
        RefSeq protein NM_073515.10
        TREEFAM TREEFAM_ID TF321490
        TrEMBL UniProtAcc G5EDH2
        UniProt_GCRP UniProtAcc G5EDH2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Jan 2022 10:41:14 WBPerson1983 Name_change: CGC_name: htrl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: htrl
    Allele (43)
    Possibly_affected_by: WBVar02157848
    Strain: WBStrain00055150
    RNASeq_FPKM (74)
    Ortholog (26)
    Paralog (11)
    Structured_description: Automated_description: Expressed in pharyngeal neurons. Is predicted to encode a protein with the following domains: Bacterial protein of unknown function (HtrL_YibB) and WlaTC/HtrL glycosyltransferase. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T11F9.12
    Corresponding_CDS_history: T11F9.12:wp214
    Corresponding_transcript: T11F9.12.1
    Other_sequence: JI167091.1
      SSC02775_1
      SS01212
      EW741910.1
      ACC30017_1
      Dviv_isotig12597
      JI173521.1
      Dviv_isotig12596
      Dviv_isotig12595
      CBC16308_1
    Associated_feature: WBsf718404
      WBsf718405
      WBsf1001366
      WBsf1001367
      WBsf1020459
      WBsf1020460
      WBsf234541
      WBsf234542
  Experimental_info: RNAi_result: WBRNAi00053121 Inferred_automatically: RNAi_primary
      WBRNAi00035477 Inferred_automatically: RNAi_primary
      WBRNAi00000267 Inferred_automatically: RNAi_primary
      WBRNAi00018599 Inferred_automatically: RNAi_primary
      WBRNAi00053120 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr16090
      Expr1010208
      Expr1035148
      Expr1156725
      Expr2006106
      Expr2024320
    Drives_construct: WBCnstr00030448
    Construct_product: WBCnstr00030448
    Microarray_results (18)
    Expression_cluster (189)
    Interaction (15)
  Map_info: Map: V Position: 3.17261
    Positive: Positive_clone: T11F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene