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WormBase Tree Display for Gene: WBGene00011680

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Name Class

WBGene00011680SMapS_parentSequenceT10B10
IdentityVersion2
NameCGC_namepkhm-2Person_evidenceWBPerson7492
Sequence_nameT10B10.3
Molecular_nameT10B10.3a
T10B10.3a.1
CE06401
T10B10.3b
CE54406
T10B10.3b.1
Other_nameCELE_T10B10.3Accession_evidenceNDBBX284606
Public_namepkhm-2
DB_infoDatabaseAceViewgeneXP798
WormQTLgeneWBGene00011680
WormFluxgeneWBGene00011680
NDBlocus_tagCELE_T10B10.3
PanthergeneCAEEL|WormBase=WBGene00011680|UniProtKB=Q22368
familyPTHR46556
NCBIgene181612
RefSeqproteinNM_001421342.1
NM_078122.6
TrEMBLUniProtAccQ22368
A0A8S4QCL7
UniProt_GCRPUniProtAccA0A8S4QCL7
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
212 Jan 2023 20:48:33WBPerson51134Name_changeCGC_namepkhm-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpkhm
Allele (49)
StrainWBStrain00036787
WBStrain00037279
RNASeq_FPKM (74)
GO_annotation00075092
00075093
00075094
00075095
00075096
00075097
OrthologWBGene00029600Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00058615Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00152924Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00072284Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00119724Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00229902Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3621Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g13880Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13305Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23149Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24952Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9707Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14637Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9023Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8817Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00170.g6122Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-T10B10.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold558.g3802Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00529.g12489Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01752Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_13278Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025574Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_026014Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_026018Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12232Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5858Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0136600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20716Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241050Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable kinesin binding activity. Predicted to be involved in Golgi organization; lysosome localization; and regulation of protein localization. Predicted to be located in endosome membrane. Expressed in anterior gonad arm.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST10B10.3a
T10B10.3b
Corresponding_transcriptT10B10.3a.1
T10B10.3b.1
Other_sequenceCR04897
CBC09022_1
CRC08278_1
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00018519Inferred_automaticallyRNAi_primary
WBRNAi00001791Inferred_automaticallyRNAi_primary
WBRNAi00062365Inferred_automaticallyRNAi_primary
WBRNAi00035406Inferred_automaticallyRNAi_primary
WBRNAi00052987Inferred_automaticallyRNAi_primary
Expr_patternExpr13128
Expr1015689
Expr1035139
Expr1156590
Expr2006054
Expr2024268
Drives_constructWBCnstr00030473
Construct_productWBCnstr00030473
Microarray_results (23)
Expression_cluster (178)
InteractionWBInteraction000552254
WBInteraction000567700
WBInteraction000573726
WBInteraction000574415
Map_infoMapXPosition22.2652
PositivePositive_cloneT10B10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00064980
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene