WormBase Tree Display for Gene: WBGene00011661
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| WBGene00011661 | SMap | S_parent | Sequence | CHROMOSOME_II | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | ztf | ||||||
| Allele (49) | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00013590 | ||||||
| 00013591 | |||||||
| 00013592 | |||||||
| 00013593 | |||||||
| 00013594 | |||||||
| Ortholog (23) | |||||||
| Paralog | WBGene00012988 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00003380 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
| WBGene00013240 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
| WBGene00013970 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
| WBGene00022592 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | T09F3.1 | |||||
| Corresponding_CDS_history | T09F3.1:wp111 | ||||||
| Corresponding_transcript | T09F3.1.1 | ||||||
| Other_sequence | FD514145.1 | ||||||
| Acan_isotig12474 | |||||||
| EX553699.1 | |||||||
| CRC02234_1 | |||||||
| Dviv_isotig25115 | |||||||
| Tcol_isotig16304 | |||||||
| Oden_isotig22175 | |||||||
| ACC19088_1 | |||||||
| CSC01618_1 | |||||||
| CR03973 | |||||||
| Associated_feature (12) | |||||||
| Transcription_factor | WBTranscriptionFactor001056 | ||||||
| Experimental_info | RNAi_result | WBRNAi00052967 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00023584 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00023308 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035396 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00023818 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00024106 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018504 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1011767 | ||||||
| Expr1035133 | |||||||
| Expr1156570 | |||||||
| Expr2018198 | |||||||
| Expr2036335 | |||||||
| Drives_construct | WBCnstr00030491 | ||||||
| Construct_product | WBCnstr00030491 | ||||||
| WBCnstr00038837 | |||||||
| Microarray_results (19) | |||||||
| Expression_cluster (89) | |||||||
| Interaction | WBInteraction000029026 | ||||||
| WBInteraction000052369 | |||||||
| WBInteraction000384547 | |||||||
| WBInteraction000530339 | |||||||
| Map_info | Map | II | Position | 2.54225 | Error | 0.008949 | |
| Positive | Positive_clone | T09F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
