WormBase Tree Display for Gene: WBGene00011651
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| WBGene00011651 | SMap | S_parent | Sequence | T09E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-217 | Person_evidence | WBPerson600 | |||||
| Sequence_name | T09E11.2 | ||||||||
| Molecular_name | T09E11.2 | ||||||||
| T09E11.2.1 | |||||||||
| CE42165 | |||||||||
| Other_name | CELE_T09E11.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nhr-217 | ||||||||
| DB_info | Database | AceView | gene | 1M933 | |||||
| WormQTL | gene | WBGene00011651 | |||||||
| WormFlux | gene | WBGene00011651 | |||||||
| NDB | locus_tag | CELE_T09E11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011651|UniProtKB=O02305 | |||||||
| family | PTHR46397 | ||||||||
| NCBI | gene | 188330 | |||||||
| RefSeq | protein | NM_060721.2 | |||||||
| SwissProt | UniProtAcc | O02305 | |||||||
| TREEFAM | TREEFAM_ID | TF321941 | |||||||
| UniProt_GCRP | UniProtAcc | O02305 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-217 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00026993 | ||||||||
| 00026994 | |||||||||
| 00026995 | |||||||||
| 00026996 | |||||||||
| 00118870 | |||||||||
| 00118871 | |||||||||
| 00118872 | |||||||||
| 00118873 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T09E11.2 | |||||||
| Corresponding_CDS_history | T09E11.2:wp187 | ||||||||
| Corresponding_transcript | T09E11.2.1 | ||||||||
| Other_sequence | CBC07088_1 | ||||||||
| Associated_feature | WBsf985549 | ||||||||
| WBsf985550 | |||||||||
| Transcription_factor | WBTranscriptionFactor000785 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00004188 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113955 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027629 | ||||||||
| Expr1156557 | |||||||||
| Expr2014120 | |||||||||
| Expr2032359 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (14) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | I | Position | 13.1537 | Error | 0.001934 | |||
| Positive | Positive_clone | T09E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5363 | |||||||
| 5409 | |||||||||
| 4363 | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
